Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC073069.1-201ENST00000428657 441 ntBASIC4.91□□□□□ -1.62
CIITAP33076 YWHAEP5-201ENST00000431545 765 ntBASIC4.91□□□□□ -1.62
CIITAP33076 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.91□□□□□ -1.62
CIITAP33076 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.91□□□□□ -1.62
CIITAP33076 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.91□□□□□ -1.62
CIITAP33076 HMGB3P6-201ENST00000444896 598 ntBASIC4.91□□□□□ -1.62
CIITAP33076 OR6K5P-201ENST00000447050 945 ntBASIC4.91□□□□□ -1.62
CIITAP33076 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.91□□□□□ -1.62
CIITAP33076 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.91□□□□□ -1.62
CIITAP33076 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.91□□□□□ -1.62
CIITAP33076 PRDX3P4-201ENST00000470828 747 ntBASIC4.91□□□□□ -1.62
CIITAP33076 AC082651.2-201ENST00000496833 166 ntBASIC4.91□□□□□ -1.62
CIITAP33076 AC010486.2-201ENST00000505572 483 ntBASIC4.91□□□□□ -1.62
CIITAP33076 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.91□□□□□ -1.62
CIITAP33076 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.91□□□□□ -1.62
CIITAP33076 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.91□□□□□ -1.62
CIITAP33076 RNA5SP73-201ENST00000516744 108 ntBASIC4.91□□□□□ -1.62
CIITAP33076 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.91□□□□□ -1.62
CIITAP33076 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.91□□□□□ -1.62
CIITAP33076 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.91□□□□□ -1.62
CIITAP33076 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.91□□□□□ -1.62
CIITAP33076 AL352979.3-201ENST00000553515 247 ntBASIC4.91□□□□□ -1.62
CIITAP33076 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.91□□□□□ -1.62
CIITAP33076 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.91□□□□□ -1.62
CIITAP33076 SLC25A36P1-201ENST00000590111 465 ntBASIC4.91□□□□□ -1.62
CIITAP33076 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.91□□□□□ -1.62
CIITAP33076 AL020997.3-201ENST00000602843 359 ntBASIC4.91□□□□□ -1.62
CIITAP33076 AC080013.6-201ENST00000606185 215 ntBASIC4.91□□□□□ -1.62
CIITAP33076 AC064807.4-201ENST00000607201 407 ntBASIC4.91□□□□□ -1.62
CIITAP33076 AC007349.4-201ENST00000608114 532 ntBASIC4.91□□□□□ -1.62
CIITAP33076 AL353600.1-201ENST00000608148 251 ntBASIC4.91□□□□□ -1.62
CIITAP33076 AC084782.3-201ENST00000612282 578 ntBASIC4.91□□□□□ -1.62
CIITAP33076 MIR6758-201ENST00000620653 63 ntBASIC4.91□□□□□ -1.62
CIITAP33076 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CIITAP33076 AP002782.1-201ENST00000623107 614 ntBASIC4.91□□□□□ -1.62
CIITAP33076 AC116563.2-201ENST00000624751 535 ntBASIC4.91□□□□□ -1.62
CIITAP33076 AP000843.1-201ENST00000624880 701 ntBASIC4.91□□□□□ -1.62
CIITAP33076 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.91□□□□□ -1.62
CIITAP33076 LINC02211-204ENST00000642024 1070 ntBASIC4.91□□□□□ -1.62
CIITAP33076 AC006042.3-201ENST00000454684 1469 ntBASIC4.91□□□□□ -1.62
CIITAP33076 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.91□□□□□ -1.62
CIITAP33076 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.91□□□□□ -1.62
CIITAP33076 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.91□□□□□ -1.62
CIITAP33076 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.91□□□□□ -1.62
CIITAP33076 AC114546.3-201ENST00000623582 1734 ntBASIC4.91□□□□□ -1.62
CIITAP33076 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CIITAP33076 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CIITAP33076 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.91□□□□□ -1.62
CIITAP33076 MTND4P10-201ENST00000446199 1363 ntBASIC4.91□□□□□ -1.62
CIITAP33076 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.9□□□□□ -1.62
CIITAP33076 AL158163.1-201ENST00000603915 1649 ntBASIC4.9□□□□□ -1.62
CIITAP33076 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.9□□□□□ -1.62
CIITAP33076 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
CIITAP33076 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CIITAP33076 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CIITAP33076 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
CIITAP33076 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CIITAP33076 RNA5SP175-201ENST00000364275 119 ntBASIC4.9□□□□□ -1.63
CIITAP33076 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.9□□□□□ -1.63
CIITAP33076 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.9□□□□□ -1.63
CIITAP33076 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.9□□□□□ -1.63
CIITAP33076 AC136624.1-201ENST00000400791 413 ntBASIC4.9□□□□□ -1.63
CIITAP33076 MIR1911-201ENST00000410783 80 ntBASIC4.9□□□□□ -1.63
CIITAP33076 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.9□□□□□ -1.63
CIITAP33076 NRBF2P2-201ENST00000413087 861 ntBASIC4.9□□□□□ -1.63
CIITAP33076 RPL21P108-201ENST00000413857 481 ntBASIC4.9□□□□□ -1.63
CIITAP33076 TCEA1P4-201ENST00000415066 844 ntBASIC4.9□□□□□ -1.63
CIITAP33076 AL008987.1-201ENST00000415528 237 ntBASIC4.9□□□□□ -1.63
CIITAP33076 TAF13P2-201ENST00000416876 286 ntBASIC4.9□□□□□ -1.63
CIITAP33076 AL358176.3-201ENST00000420757 454 ntBASIC4.9□□□□□ -1.63
CIITAP33076 GTF2IP2-201ENST00000424290 697 ntBASIC4.9□□□□□ -1.63
CIITAP33076 AC234779.1-201ENST00000425910 285 ntBASIC4.9□□□□□ -1.63
CIITAP33076 HIGD1AP12-201ENST00000427832 281 ntBASIC4.9□□□□□ -1.63
CIITAP33076 C4BPAP2-201ENST00000428434 478 ntBASIC4.9□□□□□ -1.63
CIITAP33076 MOB1AP1-201ENST00000430903 535 ntBASIC4.9□□□□□ -1.63
CIITAP33076 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.9□□□□□ -1.63
CIITAP33076 RPS3AP54-201ENST00000435535 734 ntBASIC4.9□□□□□ -1.63
CIITAP33076 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.9□□□□□ -1.63
CIITAP33076 HMGB3P9-201ENST00000441799 583 ntBASIC4.9□□□□□ -1.63
CIITAP33076 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.9□□□□□ -1.63
CIITAP33076 AC239809.1-201ENST00000450470 217 ntBASIC4.9□□□□□ -1.63
CIITAP33076 AC009963.2-201ENST00000453431 138 ntBASIC4.9□□□□□ -1.63
CIITAP33076 MRPL35P4-201ENST00000453682 566 ntBASIC4.9□□□□□ -1.63
CIITAP33076 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.9□□□□□ -1.63
CIITAP33076 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.9□□□□□ -1.63
CIITAP33076 CDC42P1-201ENST00000456658 548 ntBASIC4.9□□□□□ -1.63
CIITAP33076 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
CIITAP33076 RPL35P6-201ENST00000490024 372 ntBASIC4.9□□□□□ -1.63
CIITAP33076 AC023050.1-201ENST00000498198 304 ntBASIC4.9□□□□□ -1.63
CIITAP33076 AL592156.1-201ENST00000508758 304 ntBASIC4.9□□□□□ -1.63
CIITAP33076 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
CIITAP33076 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CIITAP33076 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.9□□□□□ -1.63
CIITAP33076 AC025260.1-201ENST00000548858 430 ntBASIC4.9□□□□□ -1.63
CIITAP33076 AGGF1P6-201ENST00000569213 976 ntBASIC4.9□□□□□ -1.63
CIITAP33076 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.9□□□□□ -1.63
CIITAP33076 MTND4LP24-201ENST00000572277 291 ntBASIC4.9□□□□□ -1.63
CIITAP33076 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.9□□□□□ -1.63
CIITAP33076 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CIITAP33076 AC133552.5-201ENST00000604266 540 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms