Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.67□□□□□ -1.34
RXRBP28702 AC008814.1-201ENST00000603797 406 ntBASIC6.67□□□□□ -1.34
RXRBP28702 AC009220.3-201ENST00000604318 586 ntBASIC6.67□□□□□ -1.34
RXRBP28702 AC098614.4-201ENST00000607601 462 ntBASIC6.67□□□□□ -1.34
RXRBP28702 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC6.67□□□□□ -1.34
RXRBP28702 AC087821.2-201ENST00000637086 450 ntBASIC6.67□□□□□ -1.34
RXRBP28702 SAMMSON-210ENST00000641260 1308 ntBASIC6.67□□□□□ -1.34
RXRBP28702 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC6.67□□□□□ -1.34
RXRBP28702 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RXRBP28702 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RXRBP28702 AC009779.8-201ENST00000641684 4384 ntBASIC6.67□□□□□ -1.34
RXRBP28702 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RXRBP28702 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
RXRBP28702 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
RXRBP28702 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RXRBP28702 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.67□□□□□ -1.34
RXRBP28702 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.66□□□□□ -1.34
RXRBP28702 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.66□□□□□ -1.34
RXRBP28702 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RXRBP28702 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.66□□□□□ -1.34
RXRBP28702 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.66□□□□□ -1.34
RXRBP28702 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.66□□□□□ -1.34
RXRBP28702 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.66□□□□□ -1.34
RXRBP28702 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
RXRBP28702 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
RXRBP28702 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RXRBP28702 MIR554-201ENST00000384874 96 ntBASIC6.66□□□□□ -1.34
RXRBP28702 RNU6-876P-201ENST00000391295 104 ntBASIC6.66□□□□□ -1.34
RXRBP28702 RPS26P8-201ENST00000393490 348 ntBASIC6.66□□□□□ -1.34
RXRBP28702 CCNG1P1-201ENST00000406783 885 ntBASIC6.66□□□□□ -1.34
RXRBP28702 TPT1P2-201ENST00000413105 503 ntBASIC6.66□□□□□ -1.34
RXRBP28702 AC007435.1-201ENST00000421086 415 ntBASIC6.66□□□□□ -1.34
RXRBP28702 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.66□□□□□ -1.34
RXRBP28702 RPL7P44-201ENST00000424827 742 ntBASIC6.66□□□□□ -1.34
RXRBP28702 TMX2P1-201ENST00000436507 708 ntBASIC6.66□□□□□ -1.34
RXRBP28702 UBE2V1P3-201ENST00000439651 417 ntBASIC6.66□□□□□ -1.34
RXRBP28702 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC6.66□□□□□ -1.34
RXRBP28702 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.66□□□□□ -1.34
RXRBP28702 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC6.66□□□□□ -1.34
RXRBP28702 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC6.66□□□□□ -1.34
RXRBP28702 AC091133.4-201ENST00000511142 308 ntBASIC6.66□□□□□ -1.34
RXRBP28702 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.66□□□□□ -1.34
RXRBP28702 Y_RNA.701-201ENST00000516812 110 ntBASIC6.66□□□□□ -1.34
RXRBP28702 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.66□□□□□ -1.34
RXRBP28702 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.66□□□□□ -1.34
RXRBP28702 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.66□□□□□ -1.34
RXRBP28702 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RXRBP28702 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.66□□□□□ -1.34
RXRBP28702 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC6.66□□□□□ -1.34
RXRBP28702 AC044913.1-201ENST00000557200 430 ntBASIC6.66□□□□□ -1.34
RXRBP28702 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.66□□□□□ -1.34
RXRBP28702 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC6.66□□□□□ -1.34
RXRBP28702 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC6.66□□□□□ -1.34
RXRBP28702 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC6.66□□□□□ -1.34
RXRBP28702 UBE2V2P2-201ENST00000587677 504 ntBASIC6.66□□□□□ -1.34
RXRBP28702 BMS1P7-201ENST00000602440 1052 ntBASIC6.66□□□□□ -1.34
RXRBP28702 AL161756.2-201ENST00000604597 246 ntBASIC6.66□□□□□ -1.34
RXRBP28702 AL049634.3-201ENST00000604968 457 ntBASIC6.66□□□□□ -1.34
RXRBP28702 AP000238.1-201ENST00000608759 426 ntBASIC6.66□□□□□ -1.34
RXRBP28702 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.66□□□□□ -1.34
RXRBP28702 FRG1KP-201ENST00000623592 341 ntBASIC6.66□□□□□ -1.34
RXRBP28702 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC6.66□□□□□ -1.34
RXRBP28702 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC6.66□□□□□ -1.34
RXRBP28702 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
RXRBP28702 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RXRBP28702 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
RXRBP28702 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RXRBP28702 VN2R3P-201ENST00000422626 1412 ntBASIC6.66□□□□□ -1.34
RXRBP28702 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.66□□□□□ -1.34
RXRBP28702 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RXRBP28702 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.66□□□□□ -1.34
RXRBP28702 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.65□□□□□ -1.34
RXRBP28702 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RXRBP28702 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.65□□□□□ -1.34
RXRBP28702 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RXRBP28702 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.65□□□□□ -1.34
RXRBP28702 Y_RNA.18-201ENST00000362461 102 ntBASIC6.65□□□□□ -1.34
RXRBP28702 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.65□□□□□ -1.34
RXRBP28702 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
RXRBP28702 RPL11P3-201ENST00000395256 523 ntBASIC6.65□□□□□ -1.34
RXRBP28702 RPS27AP11-201ENST00000402798 447 ntBASIC6.65□□□□□ -1.34
RXRBP28702 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.65□□□□□ -1.34
RXRBP28702 AC007568.1-201ENST00000422912 471 ntBASIC6.65□□□□□ -1.34
RXRBP28702 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RXRBP28702 AL035458.1-201ENST00000433096 585 ntBASIC6.65□□□□□ -1.34
RXRBP28702 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC6.65□□□□□ -1.34
RXRBP28702 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
RXRBP28702 RPL7P36-201ENST00000444633 681 ntBASIC6.65□□□□□ -1.34
RXRBP28702 TCEA1P1-201ENST00000449716 880 ntBASIC6.65□□□□□ -1.34
RXRBP28702 MTND1P16-201ENST00000465177 898 ntBASIC6.65□□□□□ -1.34
RXRBP28702 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.65□□□□□ -1.34
RXRBP28702 AC013828.1-201ENST00000481845 158 ntBASIC6.65□□□□□ -1.34
RXRBP28702 AC107398.1-201ENST00000486904 505 ntBASIC6.65□□□□□ -1.34
RXRBP28702 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.65□□□□□ -1.34
RXRBP28702 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.65□□□□□ -1.34
RXRBP28702 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC6.65□□□□□ -1.34
RXRBP28702 OR8R1P-201ENST00000543943 764 ntBASIC6.65□□□□□ -1.34
RXRBP28702 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.65□□□□□ -1.34
RXRBP28702 MIR548AB-201ENST00000584917 84 ntBASIC6.65□□□□□ -1.34
RXRBP28702 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms