Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.65□□□□□ -1.34
VARSP26640 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
VARSP26640 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VARSP26640 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VARSP26640 Y_RNA.493-201ENST00000384422 102 ntBASIC6.65□□□□□ -1.34
VARSP26640 MIR558-201ENST00000384920 94 ntBASIC6.65□□□□□ -1.34
VARSP26640 PDCL3P5-201ENST00000398028 722 ntBASIC6.65□□□□□ -1.34
VARSP26640 RNU4-25P-201ENST00000410569 230 ntBASIC6.65□□□□□ -1.34
VARSP26640 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.65□□□□□ -1.34
VARSP26640 PSMA6P3-201ENST00000428242 164 ntBASIC6.65□□□□□ -1.34
VARSP26640 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.65□□□□□ -1.34
VARSP26640 RPS26P40-201ENST00000435209 294 ntBASIC6.65□□□□□ -1.34
VARSP26640 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC6.65□□□□□ -1.34
VARSP26640 AC009518.3-201ENST00000438972 253 ntBASIC6.65□□□□□ -1.34
VARSP26640 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.65□□□□□ -1.34
VARSP26640 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC6.65□□□□□ -1.34
VARSP26640 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.65□□□□□ -1.34
VARSP26640 AC004801.2-202ENST00000463559 283 ntBASIC6.65□□□□□ -1.34
VARSP26640 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.65□□□□□ -1.34
VARSP26640 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VARSP26640 AC116562.3-201ENST00000506136 177 ntBASIC6.65□□□□□ -1.34
VARSP26640 AC116655.1-201ENST00000508324 901 ntBASIC6.65□□□□□ -1.34
VARSP26640 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.65□□□□□ -1.34
VARSP26640 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.65□□□□□ -1.34
VARSP26640 AC068587.5-201ENST00000528506 175 ntBASIC6.65□□□□□ -1.34
VARSP26640 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.65□□□□□ -1.34
VARSP26640 GNAI2P1-201ENST00000541815 315 ntBASIC6.65□□□□□ -1.34
VARSP26640 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.65□□□□□ -1.34
VARSP26640 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.65□□□□□ -1.34
VARSP26640 HSPE1P2-201ENST00000554777 306 ntBASIC6.65□□□□□ -1.34
VARSP26640 MIR5583-1-201ENST00000580941 59 ntBASIC6.65□□□□□ -1.34
VARSP26640 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.65□□□□□ -1.34
VARSP26640 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.65□□□□□ -1.34
VARSP26640 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.65□□□□□ -1.34
VARSP26640 AL096712.1-201ENST00000614561 159 ntBASIC6.65□□□□□ -1.34
VARSP26640 MIR8062-201ENST00000621515 85 ntBASIC6.65□□□□□ -1.34
VARSP26640 AC120057.5-201ENST00000623840 154 ntBASIC6.65□□□□□ -1.34
VARSP26640 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VARSP26640 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.65□□□□□ -1.34
VARSP26640 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VARSP26640 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
VARSP26640 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
VARSP26640 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.65□□□□□ -1.35
VARSP26640 AC022905.1-201ENST00000503430 3048 ntBASIC6.65□□□□□ -1.35
VARSP26640 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
VARSP26640 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.65□□□□□ -1.35
VARSP26640 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
VARSP26640 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
VARSP26640 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
VARSP26640 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.65□□□□□ -1.35
VARSP26640 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.64□□□□□ -1.35
VARSP26640 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
VARSP26640 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.64□□□□□ -1.35
VARSP26640 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
VARSP26640 AL442639.1-201ENST00000625030 1899 ntBASIC6.64□□□□□ -1.35
VARSP26640 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.64□□□□□ -1.35
VARSP26640 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VARSP26640 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.64□□□□□ -1.35
VARSP26640 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.64□□□□□ -1.35
VARSP26640 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.64□□□□□ -1.35
VARSP26640 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VARSP26640 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
VARSP26640 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
VARSP26640 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.64□□□□□ -1.35
VARSP26640 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
VARSP26640 RNY3P13-201ENST00000365542 102 ntBASIC6.64□□□□□ -1.35
VARSP26640 RNU4-2-201ENST00000365668 141 ntBASIC6.64□□□□□ -1.35
VARSP26640 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
VARSP26640 SNORD94-201ENST00000386037 137 ntBASIC6.64□□□□□ -1.35
VARSP26640 AL360182.1-201ENST00000397433 468 ntBASIC6.64□□□□□ -1.35
VARSP26640 MIR1266-201ENST00000408125 84 ntBASIC6.64□□□□□ -1.35
VARSP26640 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VARSP26640 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VARSP26640 EIF4EP1-201ENST00000422311 642 ntBASIC6.64□□□□□ -1.35
VARSP26640 PDSS1P1-201ENST00000422953 1114 ntBASIC6.64□□□□□ -1.35
VARSP26640 RPL23AP74-201ENST00000437246 471 ntBASIC6.64□□□□□ -1.35
VARSP26640 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC6.64□□□□□ -1.35
VARSP26640 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.64□□□□□ -1.35
VARSP26640 AC063943.2-201ENST00000495697 534 ntBASIC6.64□□□□□ -1.35
VARSP26640 GZMAP1-201ENST00000503054 631 ntBASIC6.64□□□□□ -1.35
VARSP26640 CARSP2-201ENST00000520688 277 ntBASIC6.64□□□□□ -1.35
VARSP26640 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.64□□□□□ -1.35
VARSP26640 AC023157.2-201ENST00000540596 141 ntBASIC6.64□□□□□ -1.35
VARSP26640 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.64□□□□□ -1.35
VARSP26640 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.64□□□□□ -1.35
VARSP26640 AC092375.1-201ENST00000550410 637 ntBASIC6.64□□□□□ -1.35
VARSP26640 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
VARSP26640 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.64□□□□□ -1.35
VARSP26640 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.64□□□□□ -1.35
VARSP26640 AC020914.7-201ENST00000594477 545 ntBASIC6.64□□□□□ -1.35
VARSP26640 AC011626.1-201ENST00000604710 562 ntBASIC6.64□□□□□ -1.35
VARSP26640 AL035410.2-201ENST00000604963 864 ntBASIC6.64□□□□□ -1.35
VARSP26640 AL008729.2-201ENST00000606393 473 ntBASIC6.64□□□□□ -1.35
VARSP26640 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.64□□□□□ -1.35
VARSP26640 AC010378.1-201ENST00000619270 362 ntBASIC6.64□□□□□ -1.35
VARSP26640 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.64□□□□□ -1.35
VARSP26640 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VARSP26640 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VARSP26640 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
VARSP26640 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms