Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC112191.2-201ENST00000522428 333 ntBASIC6.7□□□□□ -1.34
RFX1P22670 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
RFX1P22670 AC079905.1-201ENST00000549280 475 ntBASIC6.7□□□□□ -1.34
RFX1P22670 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC6.7□□□□□ -1.34
RFX1P22670 MIR3146-201ENST00000580367 79 ntBASIC6.7□□□□□ -1.34
RFX1P22670 AC018638.8-201ENST00000588755 281 ntBASIC6.7□□□□□ -1.34
RFX1P22670 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
RFX1P22670 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
RFX1P22670 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
RFX1P22670 AC024651.2-201ENST00000562480 2098 ntBASIC6.7□□□□□ -1.34
RFX1P22670 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RFX1P22670 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.69□□□□□ -1.34
RFX1P22670 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RFX1P22670 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
RFX1P22670 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.69□□□□□ -1.34
RFX1P22670 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RFX1P22670 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RFX1P22670 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
RFX1P22670 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
RFX1P22670 MFSD8-239ENST00000641590 2479 ntBASIC6.69□□□□□ -1.34
RFX1P22670 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RFX1P22670 RNU1-49P-201ENST00000363468 159 ntBASIC6.69□□□□□ -1.34
RFX1P22670 RNU1-130P-201ENST00000363930 160 ntBASIC6.69□□□□□ -1.34
RFX1P22670 Y_RNA.234-201ENST00000364409 97 ntBASIC6.69□□□□□ -1.34
RFX1P22670 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.69□□□□□ -1.34
RFX1P22670 Y_RNA.381-201ENST00000365666 102 ntBASIC6.69□□□□□ -1.34
RFX1P22670 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.69□□□□□ -1.34
RFX1P22670 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RFX1P22670 SNORA69-201ENST00000383895 132 ntBASIC6.69□□□□□ -1.34
RFX1P22670 RNU6-767P-201ENST00000384132 107 ntBASIC6.69□□□□□ -1.34
RFX1P22670 RNU6-1158P-201ENST00000391167 107 ntBASIC6.69□□□□□ -1.34
RFX1P22670 AC068050.1-201ENST00000394891 380 ntBASIC6.69□□□□□ -1.34
RFX1P22670 RPL7P60-201ENST00000397636 735 ntBASIC6.69□□□□□ -1.34
RFX1P22670 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RFX1P22670 AC007390.1-201ENST00000415722 356 ntBASIC6.69□□□□□ -1.34
RFX1P22670 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.69□□□□□ -1.34
RFX1P22670 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.69□□□□□ -1.34
RFX1P22670 AC079355.1-201ENST00000421770 223 ntBASIC6.69□□□□□ -1.34
RFX1P22670 RPS7P14-201ENST00000426405 583 ntBASIC6.69□□□□□ -1.34
RFX1P22670 AC006548.1-201ENST00000427470 102 ntBASIC6.69□□□□□ -1.34
RFX1P22670 EZH2P1-201ENST00000431167 291 ntBASIC6.69□□□□□ -1.34
RFX1P22670 AL606489.2-201ENST00000433886 234 ntBASIC6.69□□□□□ -1.34
RFX1P22670 AL731534.1-201ENST00000434711 269 ntBASIC6.69□□□□□ -1.34
RFX1P22670 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RFX1P22670 AL590399.4-201ENST00000436561 601 ntBASIC6.69□□□□□ -1.34
RFX1P22670 AC105402.2-201ENST00000438503 358 ntBASIC6.69□□□□□ -1.34
RFX1P22670 AC016691.1-201ENST00000441321 413 ntBASIC6.69□□□□□ -1.34
RFX1P22670 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.69□□□□□ -1.34
RFX1P22670 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RFX1P22670 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.69□□□□□ -1.34
RFX1P22670 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC6.69□□□□□ -1.34
RFX1P22670 BX842559.2-201ENST00000451418 605 ntBASIC6.69□□□□□ -1.34
RFX1P22670 PPIAP27-201ENST00000453800 265 ntBASIC6.69□□□□□ -1.34
RFX1P22670 AC112187.1-201ENST00000455837 479 ntBASIC6.69□□□□□ -1.34
RFX1P22670 AL445687.2-201ENST00000458156 728 ntBASIC6.69□□□□□ -1.34
RFX1P22670 AC055855.1-201ENST00000489563 579 ntBASIC6.69□□□□□ -1.34
RFX1P22670 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RFX1P22670 AC008945.1-201ENST00000505144 499 ntBASIC6.69□□□□□ -1.34
RFX1P22670 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.69□□□□□ -1.34
RFX1P22670 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.69□□□□□ -1.34
RFX1P22670 AP000907.2-201ENST00000530827 353 ntBASIC6.69□□□□□ -1.34
RFX1P22670 AC125611.2-201ENST00000551907 647 ntBASIC6.69□□□□□ -1.34
RFX1P22670 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC6.69□□□□□ -1.34
RFX1P22670 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.69□□□□□ -1.34
RFX1P22670 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.69□□□□□ -1.34
RFX1P22670 AC024940.5-201ENST00000622889 474 ntBASIC6.69□□□□□ -1.34
RFX1P22670 CR381572.1-201ENST00000625098 102 ntBASIC6.69□□□□□ -1.34
RFX1P22670 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
RFX1P22670 AC006210.2-201ENST00000367074 1545 ntBASIC6.69□□□□□ -1.34
RFX1P22670 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.69□□□□□ -1.34
RFX1P22670 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RFX1P22670 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RFX1P22670 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RFX1P22670 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
RFX1P22670 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RFX1P22670 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
RFX1P22670 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RFX1P22670 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
RFX1P22670 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RFX1P22670 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RFX1P22670 RNU6-845P-201ENST00000362578 103 ntBASIC6.68□□□□□ -1.34
RFX1P22670 RNA5SP346-201ENST00000363541 121 ntBASIC6.68□□□□□ -1.34
RFX1P22670 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RFX1P22670 U3.20-201ENST00000390909 217 ntBASIC6.68□□□□□ -1.34
RFX1P22670 RPL31P2-201ENST00000413849 377 ntBASIC6.68□□□□□ -1.34
RFX1P22670 Z93019.1-201ENST00000416450 973 ntBASIC6.68□□□□□ -1.34
RFX1P22670 AC009302.1-201ENST00000417147 390 ntBASIC6.68□□□□□ -1.34
RFX1P22670 AC069213.2-201ENST00000420238 366 ntBASIC6.68□□□□□ -1.34
RFX1P22670 AL358176.3-201ENST00000420757 454 ntBASIC6.68□□□□□ -1.34
RFX1P22670 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.68□□□□□ -1.34
RFX1P22670 RBMY2QP-201ENST00000429799 1147 ntBASIC6.68□□□□□ -1.34
RFX1P22670 AC093156.1-201ENST00000440382 670 ntBASIC6.68□□□□□ -1.34
RFX1P22670 AC114495.1-201ENST00000441274 436 ntBASIC6.68□□□□□ -1.34
RFX1P22670 GAPDHP23-201ENST00000444823 993 ntBASIC6.68□□□□□ -1.34
RFX1P22670 AC079781.2-201ENST00000446424 169 ntBASIC6.68□□□□□ -1.34
RFX1P22670 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC6.68□□□□□ -1.34
RFX1P22670 RPL7P52-201ENST00000449200 742 ntBASIC6.68□□□□□ -1.34
RFX1P22670 SLC25A51P1-201ENST00000468432 871 ntBASIC6.68□□□□□ -1.34
RFX1P22670 RN7SL177P-201ENST00000476596 299 ntBASIC6.68□□□□□ -1.34
RFX1P22670 AC025458.1-201ENST00000506046 166 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms