Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NFKB1P19838 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NFKB1P19838 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NFKB1P19838 SNORA21-201ENST00000362423 132 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 RNA5SP279-201ENST00000365513 117 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.18□□□□□ -1.42
NFKB1P19838 AL136131.1-201ENST00000406079 803 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 Y_RNA.615-201ENST00000410769 117 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC6.18□□□□□ -1.42
NFKB1P19838 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.18□□□□□ -1.42
NFKB1P19838 AC108479.1-201ENST00000431142 427 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 SNRPEP4-201ENST00000435815 279 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 CBX1P4-201ENST00000439415 457 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.18□□□□□ -1.42
NFKB1P19838 DDX3P2-201ENST00000446138 111 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 AC079781.2-201ENST00000446424 169 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 RPS20P32-201ENST00000456044 356 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.18□□□□□ -1.42
NFKB1P19838 AC124945.1-201ENST00000485133 188 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 RN7SL362P-201ENST00000494228 267 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 MTCO1P29-201ENST00000496868 288 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 AC112484.3-201ENST00000505910 329 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.18□□□□□ -1.42
NFKB1P19838 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC6.18□□□□□ -1.42
NFKB1P19838 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC6.18□□□□□ -1.42
NFKB1P19838 AC107934.1-201ENST00000522215 217 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 AL163153.1-201ENST00000554223 283 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 HSPE1P2-201ENST00000554777 306 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC6.18□□□□□ -1.42
NFKB1P19838 AC110588.1-201ENST00000559699 137 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC6.18□□□□□ -1.42
NFKB1P19838 RN7SL230P-201ENST00000580835 303 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 MIR4701-201ENST00000583094 63 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 SNORD39.3-201ENST00000584451 71 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.18□□□□□ -1.42
NFKB1P19838 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.18□□□□□ -1.42
NFKB1P19838 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.18□□□□□ -1.42
NFKB1P19838 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.18□□□□□ -1.42
NFKB1P19838 AC008687.2-201ENST00000597865 520 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.18□□□□□ -1.42
NFKB1P19838 AL355598.1-201ENST00000604169 202 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.18□□□□□ -1.42
NFKB1P19838 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NFKB1P19838 AC087588.2-201ENST00000617667 426 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC6.18□□□□□ -1.42
NFKB1P19838 U6.101-201ENST00000637707 76 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
NFKB1P19838 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.18□□□□□ -1.42
NFKB1P19838 Z95114.1-201ENST00000624264 14574 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NFKB1P19838 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NFKB1P19838 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.18□□□□□ -1.42
NFKB1P19838 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NFKB1P19838 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
NFKB1P19838 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
NFKB1P19838 AC027575.3-201ENST00000583058 2747 ntBASIC6.18□□□□□ -1.42
NFKB1P19838 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.18□□□□□ -1.42
NFKB1P19838 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.17□□□□□ -1.42
NFKB1P19838 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.17□□□□□ -1.42
NFKB1P19838 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
NFKB1P19838 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NFKB1P19838 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
NFKB1P19838 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
NFKB1P19838 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NFKB1P19838 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
NFKB1P19838 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.17□□□□□ -1.42
NFKB1P19838 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
NFKB1P19838 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NFKB1P19838 AC073365.1-203ENST00000641055 1992 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.17□□□□□ -1.42
NFKB1P19838 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
NFKB1P19838 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NFKB1P19838 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
NFKB1P19838 RNU105B-201ENST00000364478 208 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 RNU6-343P-201ENST00000364709 104 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
NFKB1P19838 MIR514A2-201ENST00000385131 88 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 MIR514A3-201ENST00000385132 88 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 SNORA77.2-201ENST00000408571 112 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.17□□□□□ -1.42
NFKB1P19838 RPL35AP31-201ENST00000418340 337 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.17□□□□□ -1.42
NFKB1P19838 NME1P1-201ENST00000420914 382 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.17□□□□□ -1.42
NFKB1P19838 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.17□□□□□ -1.42
NFKB1P19838 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.17□□□□□ -1.42
NFKB1P19838 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.17□□□□□ -1.42
NFKB1P19838 ERLEC1P1-201ENST00000433806 578 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.17□□□□□ -1.42
NFKB1P19838 AC092349.1-201ENST00000504903 310 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.17□□□□□ -1.42
NFKB1P19838 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.17□□□□□ -1.42
NFKB1P19838 TTC39CP1-201ENST00000512513 755 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 RNU6-410P-201ENST00000517006 107 ntBASIC6.17□□□□□ -1.42
NFKB1P19838 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
NFKB1P19838 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.17□□□□□ -1.42
NFKB1P19838 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.17□□□□□ -1.42
NFKB1P19838 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.17□□□□□ -1.42
NFKB1P19838 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms