Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RN7SL515P-201ENST00000463999 297 ntBASIC6.34□□□□□ -1.39
LIG1P18858 RPS17P15-201ENST00000475609 349 ntBASIC6.34□□□□□ -1.39
LIG1P18858 OR5M14P-201ENST00000506803 618 ntBASIC6.34□□□□□ -1.39
LIG1P18858 AC106872.4-201ENST00000510050 523 ntBASIC6.34□□□□□ -1.39
LIG1P18858 SNORA18.6-201ENST00000516792 115 ntBASIC6.34□□□□□ -1.39
LIG1P18858 SNORA43.3-201ENST00000517240 103 ntBASIC6.34□□□□□ -1.39
LIG1P18858 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.34□□□□□ -1.39
LIG1P18858 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.34□□□□□ -1.39
LIG1P18858 PMS2P3-207ENST00000529061 717 ntBASIC6.34□□□□□ -1.39
LIG1P18858 OR5AP1P-201ENST00000529730 940 ntBASIC6.34□□□□□ -1.39
LIG1P18858 SLC2A13P1-201ENST00000531560 322 ntBASIC6.34□□□□□ -1.39
LIG1P18858 AC107918.3-201ENST00000533272 382 ntBASIC6.34□□□□□ -1.39
LIG1P18858 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC6.34□□□□□ -1.39
LIG1P18858 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.34□□□□□ -1.39
LIG1P18858 AC008083.2-201ENST00000546707 476 ntBASIC6.34□□□□□ -1.39
LIG1P18858 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.34□□□□□ -1.39
LIG1P18858 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.34□□□□□ -1.39
LIG1P18858 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.34□□□□□ -1.39
LIG1P18858 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.34□□□□□ -1.39
LIG1P18858 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.34□□□□□ -1.39
LIG1P18858 AC108738.1-201ENST00000603703 237 ntBASIC6.34□□□□□ -1.39
LIG1P18858 AL009028.1-201ENST00000604895 802 ntBASIC6.34□□□□□ -1.39
LIG1P18858 AC010200.2-201ENST00000605098 235 ntBASIC6.34□□□□□ -1.39
LIG1P18858 AC069304.2-201ENST00000605154 435 ntBASIC6.34□□□□□ -1.39
LIG1P18858 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC6.34□□□□□ -1.39
LIG1P18858 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.34□□□□□ -1.39
LIG1P18858 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.34□□□□□ -1.39
LIG1P18858 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.34□□□□□ -1.39
LIG1P18858 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.34□□□□□ -1.39
LIG1P18858 AC002525.1-201ENST00000624392 1622 ntBASIC6.34□□□□□ -1.39
LIG1P18858 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LIG1P18858 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
LIG1P18858 AL138820.1-201ENST00000617901 5305 ntBASIC6.34□□□□□ -1.39
LIG1P18858 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
LIG1P18858 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LIG1P18858 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
LIG1P18858 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.34□□□□□ -1.4
LIG1P18858 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
LIG1P18858 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LIG1P18858 BTBD10P1-201ENST00000549824 1352 ntBASIC6.33□□□□□ -1.4
LIG1P18858 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
LIG1P18858 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.33□□□□□ -1.4
LIG1P18858 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
LIG1P18858 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC6.33□□□□□ -1.4
LIG1P18858 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
LIG1P18858 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
LIG1P18858 AC092681.1-201ENST00000297369 291 ntBASIC6.33□□□□□ -1.4
LIG1P18858 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
LIG1P18858 RNU6-1090P-201ENST00000364065 94 ntBASIC6.33□□□□□ -1.4
LIG1P18858 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIG1P18858 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
LIG1P18858 SNORA68.2-201ENST00000391263 128 ntBASIC6.33□□□□□ -1.4
LIG1P18858 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
LIG1P18858 AL589647.1-201ENST00000402485 466 ntBASIC6.33□□□□□ -1.4
LIG1P18858 MIR1303-201ENST00000408625 86 ntBASIC6.33□□□□□ -1.4
LIG1P18858 RNA5SP178-201ENST00000410380 128 ntBASIC6.33□□□□□ -1.4
LIG1P18858 RN7SKP286-201ENST00000410894 299 ntBASIC6.33□□□□□ -1.4
LIG1P18858 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LIG1P18858 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.33□□□□□ -1.4
LIG1P18858 C1DP2-201ENST00000418167 426 ntBASIC6.33□□□□□ -1.4
LIG1P18858 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC6.33□□□□□ -1.4
LIG1P18858 RIMKLBP2-201ENST00000424737 654 ntBASIC6.33□□□□□ -1.4
LIG1P18858 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.33□□□□□ -1.4
LIG1P18858 RPS20P24-201ENST00000457473 361 ntBASIC6.33□□□□□ -1.4
LIG1P18858 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC6.33□□□□□ -1.4
LIG1P18858 AC021205.1-201ENST00000468797 348 ntBASIC6.33□□□□□ -1.4
LIG1P18858 RN7SL174P-201ENST00000475578 289 ntBASIC6.33□□□□□ -1.4
LIG1P18858 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.33□□□□□ -1.4
LIG1P18858 RPS29P25-201ENST00000481709 171 ntBASIC6.33□□□□□ -1.4
LIG1P18858 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.33□□□□□ -1.4
LIG1P18858 RPL15P21-201ENST00000495592 567 ntBASIC6.33□□□□□ -1.4
LIG1P18858 HMGB1P29-201ENST00000505659 499 ntBASIC6.33□□□□□ -1.4
LIG1P18858 AC098799.3-201ENST00000506095 438 ntBASIC6.33□□□□□ -1.4
LIG1P18858 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.33□□□□□ -1.4
LIG1P18858 RNA5SP228-201ENST00000516232 133 ntBASIC6.33□□□□□ -1.4
LIG1P18858 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.33□□□□□ -1.4
LIG1P18858 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.33□□□□□ -1.4
LIG1P18858 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC6.33□□□□□ -1.4
LIG1P18858 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC6.33□□□□□ -1.4
LIG1P18858 MIR5697-201ENST00000578045 78 ntBASIC6.33□□□□□ -1.4
LIG1P18858 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LIG1P18858 MIR4311-201ENST00000580794 100 ntBASIC6.33□□□□□ -1.4
LIG1P18858 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.33□□□□□ -1.4
LIG1P18858 AC115286.1-201ENST00000604298 434 ntBASIC6.33□□□□□ -1.4
LIG1P18858 AC112187.2-201ENST00000604345 283 ntBASIC6.33□□□□□ -1.4
LIG1P18858 AC090607.5-201ENST00000615692 224 ntBASIC6.33□□□□□ -1.4
LIG1P18858 AC009159.1-201ENST00000618386 642 ntBASIC6.33□□□□□ -1.4
LIG1P18858 AC024614.3-201ENST00000637860 256 ntBASIC6.33□□□□□ -1.4
LIG1P18858 AC006026.1-201ENST00000444025 1803 ntBASIC6.33□□□□□ -1.4
LIG1P18858 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.33□□□□□ -1.4
LIG1P18858 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIG1P18858 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.33□□□□□ -1.4
LIG1P18858 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.33□□□□□ -1.4
LIG1P18858 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIG1P18858 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIG1P18858 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIG1P18858 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIG1P18858 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LIG1P18858 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LIG1P18858 SRRM1P3-201ENST00000426911 2678 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms