Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC172P0C7W6 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CCDC172P0C7W6 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC172P0C7W6 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCDC172P0C7W6 SNORA70C-201ENST00000384538 135 ntBASIC4.12□□□□□ -1.75
CCDC172P0C7W6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCDC172P0C7W6 ATP5F1P4-201ENST00000397288 746 ntBASIC4.12□□□□□ -1.75
CCDC172P0C7W6 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC172P0C7W6 OR8G2P-201ENST00000412796 908 ntBASIC4.12□□□□□ -1.75
CCDC172P0C7W6 RPL31P12-201ENST00000422587 358 ntBASIC4.12□□□□□ -1.75
CCDC172P0C7W6 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CCDC172P0C7W6 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC172P0C7W6 AC006480.1-201ENST00000449887 378 ntBASIC4.12□□□□□ -1.75
CCDC172P0C7W6 C1DP3-201ENST00000455013 423 ntBASIC4.12□□□□□ -1.75
CCDC172P0C7W6 RPS7P7-201ENST00000463499 571 ntBASIC4.12□□□□□ -1.75
CCDC172P0C7W6 AP002884.2-201ENST00000471647 395 ntBASIC4.12□□□□□ -1.75
CCDC172P0C7W6 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC172P0C7W6 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC172P0C7W6 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC172P0C7W6 AC025884.1-201ENST00000556034 378 ntBASIC4.12□□□□□ -1.75
CCDC172P0C7W6 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC172P0C7W6 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC172P0C7W6 AC099489.2-201ENST00000574976 260 ntBASIC4.12□□□□□ -1.75
CCDC172P0C7W6 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC172P0C7W6 AC011492.1-201ENST00000600023 315 ntBASIC4.12□□□□□ -1.75
CCDC172P0C7W6 AC005021.1-201ENST00000608730 355 ntBASIC4.12□□□□□ -1.75
CCDC172P0C7W6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
CCDC172P0C7W6 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC172P0C7W6 AL592494.2-201ENST00000425455 1548 ntBASIC4.11□□□□□ -1.75
CCDC172P0C7W6 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 AC006504.1-201ENST00000562493 3666 ntBASIC4.11□□□□□ -1.75
CCDC172P0C7W6 RLIMP1-201ENST00000339626 1680 ntBASIC4.11□□□□□ -1.75
CCDC172P0C7W6 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 CR381670.1-201ENST00000624291 1693 ntBASIC4.11□□□□□ -1.75
CCDC172P0C7W6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 SNORA62-201ENST00000365493 153 ntBASIC4.11□□□□□ -1.75
CCDC172P0C7W6 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 TBCAP1-201ENST00000436520 327 ntBASIC4.11□□□□□ -1.75
CCDC172P0C7W6 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 NANOGP10-201ENST00000453325 895 ntBASIC4.11□□□□□ -1.75
CCDC172P0C7W6 RPS20P32-201ENST00000456044 356 ntBASIC4.11□□□□□ -1.75
CCDC172P0C7W6 RPS23P7-201ENST00000466210 444 ntBASIC4.11□□□□□ -1.75
CCDC172P0C7W6 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 AC010265.1-201ENST00000513509 211 ntBASIC4.11□□□□□ -1.75
CCDC172P0C7W6 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 OR4U1P-201ENST00000554958 912 ntBASIC4.11□□□□□ -1.75
CCDC172P0C7W6 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 AP003117.1-201ENST00000602771 554 ntBASIC4.11□□□□□ -1.75
CCDC172P0C7W6 AL445423.1-201ENST00000609941 536 ntBASIC4.11□□□□□ -1.75
CCDC172P0C7W6 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 MIR4278-201ENST00000636094 69 ntBASIC4.11□□□□□ -1.75
CCDC172P0C7W6 AF001550.2-201ENST00000636643 217 ntBASIC4.11□□□□□ -1.75
CCDC172P0C7W6 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC172P0C7W6 SRP72P2-201ENST00000344851 1979 ntBASIC4.11□□□□□ -1.75
CCDC172P0C7W6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC172P0C7W6 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC172P0C7W6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC172P0C7W6 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC172P0C7W6 MFSD8-236ENST00000641509 4050 ntBASIC4.1□□□□□ -1.75
CCDC172P0C7W6 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC172P0C7W6 RNF6P1-201ENST00000444889 1784 ntBASIC4.1□□□□□ -1.75
CCDC172P0C7W6 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC172P0C7W6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC172P0C7W6 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC172P0C7W6 ELOCP6-201ENST00000429066 328 ntBASIC4.1□□□□□ -1.75
CCDC172P0C7W6 CYCSP43-201ENST00000438233 310 ntBASIC4.1□□□□□ -1.75
CCDC172P0C7W6 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.1□□□□□ -1.75
CCDC172P0C7W6 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.1□□□□□ -1.75
CCDC172P0C7W6 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC172P0C7W6 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC172P0C7W6 ELOCP12-201ENST00000458706 328 ntBASIC4.1□□□□□ -1.75
CCDC172P0C7W6 AC104629.2-201ENST00000468627 598 ntBASIC4.1□□□□□ -1.75
CCDC172P0C7W6 RPL7P19-201ENST00000469948 618 ntBASIC4.1□□□□□ -1.75
CCDC172P0C7W6 AC078817.1-201ENST00000492623 435 ntBASIC4.1□□□□□ -1.75
CCDC172P0C7W6 RN7SKP83-201ENST00000516512 178 ntBASIC4.1□□□□□ -1.75
CCDC172P0C7W6 HIGD1AP18-201ENST00000520730 278 ntBASIC4.1□□□□□ -1.75
CCDC172P0C7W6 OR5D17P-201ENST00000531492 978 ntBASIC4.1□□□□□ -1.75
CCDC172P0C7W6 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC172P0C7W6 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC172P0C7W6 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC172P0C7W6 NF1P5-201ENST00000588287 448 ntBASIC4.1□□□□□ -1.75
CCDC172P0C7W6 AL023583.1-201ENST00000607518 1143 ntBASIC4.1□□□□□ -1.75
CCDC172P0C7W6 MIR6867-201ENST00000610636 67 ntBASIC4.1□□□□□ -1.75
CCDC172P0C7W6 AC006338.2-201ENST00000616864 791 ntBASIC4.1□□□□□ -1.75
CCDC172P0C7W6 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms