Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HMGB1P09429 AC092435.4-201ENST00000623012 4159 ntBASIC5.78□□□□□ -1.48
HMGB1P09429 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB1P09429 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGB1P09429 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB1P09429 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGB1P09429 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB1P09429 RNU6-216P-201ENST00000363282 104 ntBASIC5.78□□□□□ -1.48
HMGB1P09429 AL357515.1-201ENST00000402967 542 ntBASIC5.78□□□□□ -1.48
HMGB1P09429 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGB1P09429 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGB1P09429 AC092447.6-201ENST00000414578 210 ntBASIC5.78□□□□□ -1.48
HMGB1P09429 TBCAP2-201ENST00000416175 326 ntBASIC5.78□□□□□ -1.48
HMGB1P09429 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGB1P09429 AC093162.1-201ENST00000419682 124 ntBASIC5.78□□□□□ -1.48
HMGB1P09429 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGB1P09429 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB1P09429 RPL7P11-201ENST00000437586 658 ntBASIC5.78□□□□□ -1.48
HMGB1P09429 EEF1A1P39-201ENST00000440791 250 ntBASIC5.78□□□□□ -1.48
HMGB1P09429 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGB1P09429 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGB1P09429 RPL39P6-201ENST00000448289 150 ntBASIC5.78□□□□□ -1.48
HMGB1P09429 AL031313.1-201ENST00000448435 256 ntBASIC5.78□□□□□ -1.48
HMGB1P09429 RPSAP50-201ENST00000481955 852 ntBASIC5.78□□□□□ -1.48
HMGB1P09429 AC020890.1-201ENST00000491837 504 ntBASIC5.78□□□□□ -1.48
HMGB1P09429 AC008953.1-201ENST00000497334 318 ntBASIC5.78□□□□□ -1.48
HMGB1P09429 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGB1P09429 AP001636.2-201ENST00000525517 696 ntBASIC5.78□□□□□ -1.48
HMGB1P09429 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.78□□□□□ -1.48
HMGB1P09429 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.78□□□□□ -1.48
HMGB1P09429 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.78□□□□□ -1.48
HMGB1P09429 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGB1P09429 RN7SL435P-201ENST00000584418 282 ntBASIC5.78□□□□□ -1.48
HMGB1P09429 AL512782.1-201ENST00000603093 364 ntBASIC5.78□□□□□ -1.48
HMGB1P09429 AC025946.2-201ENST00000603398 234 ntBASIC5.78□□□□□ -1.48
HMGB1P09429 AL160237.3-201ENST00000604114 1013 ntBASIC5.78□□□□□ -1.48
HMGB1P09429 AC023158.2-201ENST00000614876 543 ntBASIC5.78□□□□□ -1.48
HMGB1P09429 AC120349.2-201ENST00000625002 298 ntBASIC5.78□□□□□ -1.48
HMGB1P09429 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGB1P09429 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB1P09429 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB1P09429 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGB1P09429 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB1P09429 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HMGB1P09429 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGB1P09429 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB1P09429 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC5.77□□□□□ -1.49
HMGB1P09429 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB1P09429 THAP12P5-201ENST00000405864 2275 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 AC099654.2-201ENST00000433031 1980 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 SNRPEP3-201ENST00000338402 276 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 RNU4-4P-201ENST00000364588 130 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 RNU6-413P-201ENST00000384115 107 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 RNU2-71P-201ENST00000411395 189 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 NRBF2P2-201ENST00000413087 861 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGB1P09429 GTF2IP5-201ENST00000414608 731 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.77□□□□□ -1.49
HMGB1P09429 RPS3AP37-201ENST00000419176 745 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 BX510359.3-201ENST00000422168 306 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 EIF4HP2-201ENST00000424380 563 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 CKS1BP6-201ENST00000424932 240 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB1P09429 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGB1P09429 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.77□□□□□ -1.49
HMGB1P09429 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGB1P09429 RPL23AP76-201ENST00000441860 458 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 MTCYBP11-201ENST00000447254 1109 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 RPS24P6-201ENST00000452670 400 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGB1P09429 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGB1P09429 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGB1P09429 RPL7P22-201ENST00000466005 733 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGB1P09429 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB1P09429 RPS4XP13-201ENST00000483219 789 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 RN7SL558P-201ENST00000497468 299 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGB1P09429 MRPS33P2-201ENST00000507850 322 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGB1P09429 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGB1P09429 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGB1P09429 AC008802.1-201ENST00000519121 791 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
HMGB1P09429 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGB1P09429 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.77□□□□□ -1.49
HMGB1P09429 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HMGB1P09429 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGB1P09429 HMGN2P6-201ENST00000551091 273 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 EEF1B2P4-201ENST00000551398 348 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HMGB1P09429 AL132657.2-201ENST00000564417 358 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 AC087481.2-201ENST00000565492 330 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.77□□□□□ -1.49
HMGB1P09429 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 AC055876.5-201ENST00000605667 259 ntBASIC5.77□□□□□ -1.49
HMGB1P09429 AC092953.2-201ENST00000608000 699 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms