Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3□□□□□ -1.93
CTSDP07339 HMGB3P21-201ENST00000452483 547 ntBASIC3□□□□□ -1.93
CTSDP07339 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3□□□□□ -1.93
CTSDP07339 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3□□□□□ -1.93
CTSDP07339 AC018635.1-201ENST00000468292 1030 ntBASIC3□□□□□ -1.93
CTSDP07339 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3□□□□□ -1.93
CTSDP07339 RPS4XP15-201ENST00000489210 795 ntBASIC3□□□□□ -1.93
CTSDP07339 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3□□□□□ -1.93
CTSDP07339 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC3□□□□□ -1.93
CTSDP07339 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3□□□□□ -1.93
CTSDP07339 PHBP14-201ENST00000512887 367 ntBASIC3□□□□□ -1.93
CTSDP07339 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3□□□□□ -1.93
CTSDP07339 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3□□□□□ -1.93
CTSDP07339 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3□□□□□ -1.93
CTSDP07339 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3□□□□□ -1.93
CTSDP07339 AC007224.1-201ENST00000564410 144 ntBASIC3□□□□□ -1.93
CTSDP07339 AC120057.2-201ENST00000571520 271 ntBASIC3□□□□□ -1.93
CTSDP07339 AC006077.1-201ENST00000604746 343 ntBASIC3□□□□□ -1.93
CTSDP07339 AL356274.1-201ENST00000617064 410 ntBASIC3□□□□□ -1.93
CTSDP07339 AP003400.2-201ENST00000624036 666 ntBASIC3□□□□□ -1.93
CTSDP07339 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3□□□□□ -1.93
CTSDP07339 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3□□□□□ -1.93
CTSDP07339 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CTSDP07339 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3□□□□□ -1.93
CTSDP07339 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3□□□□□ -1.93
CTSDP07339 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CTSDP07339 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3□□□□□ -1.93
CTSDP07339 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3□□□□□ -1.93
CTSDP07339 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CTSDP07339 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CTSDP07339 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CTSDP07339 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CTSDP07339 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.99□□□□□ -1.93
CTSDP07339 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CTSDP07339 MIR372-201ENST00000362225 67 ntBASIC2.99□□□□□ -1.93
CTSDP07339 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CTSDP07339 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CTSDP07339 RNA5SP31-201ENST00000411144 127 ntBASIC2.99□□□□□ -1.93
CTSDP07339 MTND4P22-201ENST00000413116 1169 ntBASIC2.99□□□□□ -1.93
CTSDP07339 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC2.99□□□□□ -1.93
CTSDP07339 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC2.99□□□□□ -1.93
CTSDP07339 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.99□□□□□ -1.93
CTSDP07339 AL117339.2-201ENST00000430475 180 ntBASIC2.99□□□□□ -1.93
CTSDP07339 OR4C10P-201ENST00000434991 931 ntBASIC2.99□□□□□ -1.93
CTSDP07339 AL645931.1-201ENST00000439737 410 ntBASIC2.99□□□□□ -1.93
CTSDP07339 AL357552.1-201ENST00000445254 415 ntBASIC2.99□□□□□ -1.93
CTSDP07339 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CTSDP07339 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC2.99□□□□□ -1.93
CTSDP07339 RN7SL442P-201ENST00000473804 320 ntBASIC2.99□□□□□ -1.93
CTSDP07339 RPL23AP44-201ENST00000482216 473 ntBASIC2.99□□□□□ -1.93
CTSDP07339 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC2.99□□□□□ -1.93
CTSDP07339 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC2.99□□□□□ -1.93
CTSDP07339 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.99□□□□□ -1.93
CTSDP07339 FABP5P12-201ENST00000515543 389 ntBASIC2.99□□□□□ -1.93
CTSDP07339 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.99□□□□□ -1.93
CTSDP07339 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC2.99□□□□□ -1.93
CTSDP07339 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CTSDP07339 OR8X1P-201ENST00000534542 869 ntBASIC2.99□□□□□ -1.93
CTSDP07339 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC2.99□□□□□ -1.93
CTSDP07339 AC026333.2-201ENST00000542164 106 ntBASIC2.99□□□□□ -1.93
CTSDP07339 AC004024.1-201ENST00000549244 247 ntBASIC2.99□□□□□ -1.93
CTSDP07339 DUXAP6-201ENST00000553858 601 ntBASIC2.99□□□□□ -1.93
CTSDP07339 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC2.99□□□□□ -1.93
CTSDP07339 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.99□□□□□ -1.93
CTSDP07339 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC2.99□□□□□ -1.93
CTSDP07339 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.99□□□□□ -1.93
CTSDP07339 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.99□□□□□ -1.93
CTSDP07339 AC005255.1-201ENST00000593748 216 ntBASIC2.99□□□□□ -1.93
CTSDP07339 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.99□□□□□ -1.93
CTSDP07339 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC2.99□□□□□ -1.93
CTSDP07339 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.99□□□□□ -1.93
CTSDP07339 XIST_intron.1-201ENST00000619444 68 ntBASIC2.99□□□□□ -1.93
CTSDP07339 MIR6500-201ENST00000622700 86 ntBASIC2.99□□□□□ -1.93
CTSDP07339 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC2.99□□□□□ -1.93
CTSDP07339 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CTSDP07339 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.99□□□□□ -1.93
CTSDP07339 AC007656.2-201ENST00000624902 4547 ntBASIC2.99□□□□□ -1.93
CTSDP07339 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CTSDP07339 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC2.98□□□□□ -1.93
CTSDP07339 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.98□□□□□ -1.93
CTSDP07339 OR10AB1P-202ENST00000641219 1686 ntBASIC2.98□□□□□ -1.93
CTSDP07339 SEPT7P7-201ENST00000420492 1301 ntBASIC2.98□□□□□ -1.93
CTSDP07339 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CTSDP07339 AC091152.2-201ENST00000591628 2569 ntBASIC2.98□□□□□ -1.93
CTSDP07339 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CTSDP07339 RN7SKP227-201ENST00000364445 330 ntBASIC2.98□□□□□ -1.93
CTSDP07339 RNU4-7P-201ENST00000364758 141 ntBASIC2.98□□□□□ -1.93
CTSDP07339 U3.15-201ENST00000365398 212 ntBASIC2.98□□□□□ -1.93
CTSDP07339 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.98□□□□□ -1.93
CTSDP07339 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC2.98□□□□□ -1.93
CTSDP07339 RPS7P13-201ENST00000413955 498 ntBASIC2.98□□□□□ -1.93
CTSDP07339 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.98□□□□□ -1.93
CTSDP07339 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.98□□□□□ -1.93
CTSDP07339 GLRXP1-201ENST00000423261 334 ntBASIC2.98□□□□□ -1.93
CTSDP07339 SDCBPP2-201ENST00000424643 885 ntBASIC2.98□□□□□ -1.93
CTSDP07339 AC004975.1-201ENST00000428733 208 ntBASIC2.98□□□□□ -1.93
CTSDP07339 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC2.98□□□□□ -1.93
CTSDP07339 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.98□□□□□ -1.93
CTSDP07339 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.98□□□□□ -1.93
CTSDP07339 AL354710.1-201ENST00000453641 246 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms