Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RHEBP3-201ENST00000411920 351 ntBASIC3.53□□□□□ -1.84
HLA-DQB2P05538 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DQB2P05538 OR6K4P-201ENST00000423179 955 ntBASIC3.53□□□□□ -1.84
HLA-DQB2P05538 AL158071.1-201ENST00000430315 461 ntBASIC3.53□□□□□ -1.84
HLA-DQB2P05538 AC073063.1-201ENST00000434352 607 ntBASIC3.53□□□□□ -1.84
HLA-DQB2P05538 RPL12P46-201ENST00000436610 195 ntBASIC3.53□□□□□ -1.84
HLA-DQB2P05538 AC009263.1-201ENST00000441193 1239 ntBASIC3.53□□□□□ -1.84
HLA-DQB2P05538 AL357552.1-201ENST00000445254 415 ntBASIC3.53□□□□□ -1.84
HLA-DQB2P05538 RPL21P23-201ENST00000446654 460 ntBASIC3.53□□□□□ -1.84
HLA-DQB2P05538 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DQB2P05538 AC025518.1-201ENST00000479856 347 ntBASIC3.53□□□□□ -1.84
HLA-DQB2P05538 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DQB2P05538 HMGN1P15-201ENST00000513870 295 ntBASIC3.53□□□□□ -1.84
HLA-DQB2P05538 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DQB2P05538 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DQB2P05538 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DQB2P05538 AC092851.1-201ENST00000535964 478 ntBASIC3.53□□□□□ -1.84
HLA-DQB2P05538 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DQB2P05538 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.53□□□□□ -1.84
HLA-DQB2P05538 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DQB2P05538 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DQB2P05538 GMCL1P2-201ENST00000605230 823 ntBASIC3.53□□□□□ -1.84
HLA-DQB2P05538 AC243312.2-201ENST00000623340 601 ntBASIC3.53□□□□□ -1.84
HLA-DQB2P05538 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DQB2P05538 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DQB2P05538 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DQB2P05538 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DQB2P05538 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.85
HLA-DQB2P05538 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
HLA-DQB2P05538 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.53□□□□□ -1.85
HLA-DQB2P05538 AC092079.1-201ENST00000558620 1985 ntBASIC3.52□□□□□ -1.85
HLA-DQB2P05538 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 RNU4-7P-201ENST00000364758 141 ntBASIC3.52□□□□□ -1.85
HLA-DQB2P05538 SNORA62.3-201ENST00000365110 153 ntBASIC3.52□□□□□ -1.85
HLA-DQB2P05538 HMGB3P18-201ENST00000406327 590 ntBASIC3.52□□□□□ -1.85
HLA-DQB2P05538 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 AC239809.1-201ENST00000450470 217 ntBASIC3.52□□□□□ -1.85
HLA-DQB2P05538 IFNWP4-201ENST00000453148 294 ntBASIC3.52□□□□□ -1.85
HLA-DQB2P05538 AC026784.1-201ENST00000507986 352 ntBASIC3.52□□□□□ -1.85
HLA-DQB2P05538 PCBP2P3-201ENST00000509726 843 ntBASIC3.52□□□□□ -1.85
HLA-DQB2P05538 AC021146.1-201ENST00000511202 716 ntBASIC3.52□□□□□ -1.85
HLA-DQB2P05538 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 NPM1P52-201ENST00000518264 846 ntBASIC3.52□□□□□ -1.85
HLA-DQB2P05538 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 OR8X1P-201ENST00000534542 869 ntBASIC3.52□□□□□ -1.85
HLA-DQB2P05538 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 AC006133.1-201ENST00000617106 264 ntBASIC3.52□□□□□ -1.85
HLA-DQB2P05538 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 AL645937.1-201ENST00000641739 1652 ntBASIC3.52□□□□□ -1.85
HLA-DQB2P05538 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
HLA-DQB2P05538 AL451142.2-201ENST00000429076 2090 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.51□□□□□ -1.85
HLA-DQB2P05538 AL049555.1-201ENST00000562834 1933 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 MIR423-201ENST00000362201 94 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 RNU4-35P-201ENST00000362588 141 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQB2P05538 SNORD17-201ENST00000390930 237 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DQB2P05538 PTMAP2-201ENST00000397627 327 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 RPL30P2-201ENST00000414021 291 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 RPS29P4-201ENST00000414733 161 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQB2P05538 HMGN2P31-201ENST00000432430 273 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 AL035458.1-201ENST00000433096 585 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 AC092641.1-201ENST00000440229 772 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 RBMY2UP-201ENST00000453474 324 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 SNORA84-201ENST00000459229 133 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 FTH1P2-201ENST00000466086 412 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DQB2P05538 SNORA67.7-201ENST00000516664 135 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 AC109635.6-201ENST00000525487 1113 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 OR5B10P-201ENST00000532869 642 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DQB2P05538 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DQB2P05538 AC018552.3-201ENST00000567416 561 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DQB2P05538 MIR3158-1-201ENST00000583596 81 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 MIR7851-201ENST00000610611 160 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 AC034229.5-201ENST00000624258 185 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DQB2P05538 AL392088.2-201ENST00000637607 285 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms