Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.18□□□□□ -1.74
COL1A1P02452 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL1A1P02452 RPS20P1-201ENST00000434853 354 ntBASIC4.18□□□□□ -1.74
COL1A1P02452 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.18□□□□□ -1.74
COL1A1P02452 RSL24D1P3-201ENST00000449255 495 ntBASIC4.18□□□□□ -1.74
COL1A1P02452 RPS27AP1-201ENST00000475545 471 ntBASIC4.18□□□□□ -1.74
COL1A1P02452 HMGB3P14-201ENST00000494195 599 ntBASIC4.18□□□□□ -1.74
COL1A1P02452 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.18□□□□□ -1.74
COL1A1P02452 AC022149.2-201ENST00000621061 203 ntBASIC4.18□□□□□ -1.74
COL1A1P02452 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL1A1P02452 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
COL1A1P02452 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
COL1A1P02452 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL1A1P02452 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL1A1P02452 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL1A1P02452 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.17□□□□□ -1.74
COL1A1P02452 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL1A1P02452 U3.26-201ENST00000391236 204 ntBASIC4.17□□□□□ -1.74
COL1A1P02452 AC091862.1-201ENST00000438016 1100 ntBASIC4.17□□□□□ -1.74
COL1A1P02452 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.17□□□□□ -1.74
COL1A1P02452 RPS3AP14-201ENST00000483907 780 ntBASIC4.17□□□□□ -1.74
COL1A1P02452 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.17□□□□□ -1.74
COL1A1P02452 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.17□□□□□ -1.74
COL1A1P02452 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.17□□□□□ -1.74
COL1A1P02452 AL606834.2-201ENST00000602954 668 ntBASIC4.17□□□□□ -1.74
COL1A1P02452 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.17□□□□□ -1.74
COL1A1P02452 AC073869.7-201ENST00000640874 297 ntBASIC4.17□□□□□ -1.74
COL1A1P02452 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL1A1P02452 AL353743.1-202ENST00000431724 1695 ntBASIC4.17□□□□□ -1.74
COL1A1P02452 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL1A1P02452 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL1A1P02452 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL1A1P02452 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
COL1A1P02452 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
COL1A1P02452 RPL23AP57-201ENST00000332361 466 ntBASIC4.16□□□□□ -1.74
COL1A1P02452 RNA5SP374-201ENST00000362939 125 ntBASIC4.16□□□□□ -1.74
COL1A1P02452 UBA52P6-201ENST00000399822 382 ntBASIC4.16□□□□□ -1.74
COL1A1P02452 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.16□□□□□ -1.74
COL1A1P02452 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.16□□□□□ -1.74
COL1A1P02452 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.16□□□□□ -1.74
COL1A1P02452 ANP32BP2-201ENST00000454525 545 ntBASIC4.16□□□□□ -1.74
COL1A1P02452 AC023598.1-201ENST00000472521 361 ntBASIC4.16□□□□□ -1.74
COL1A1P02452 SUMO2P4-201ENST00000504193 276 ntBASIC4.16□□□□□ -1.74
COL1A1P02452 AC005798.1-201ENST00000513715 387 ntBASIC4.16□□□□□ -1.74
COL1A1P02452 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.16□□□□□ -1.74
COL1A1P02452 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.16□□□□□ -1.74
COL1A1P02452 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.16□□□□□ -1.74
COL1A1P02452 MIR4276-201ENST00000584832 70 ntBASIC4.16□□□□□ -1.74
COL1A1P02452 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.16□□□□□ -1.74
COL1A1P02452 AC125494.3-201ENST00000602759 455 ntBASIC4.16□□□□□ -1.74
COL1A1P02452 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
COL1A1P02452 AL158062.1-201ENST00000619632 745 ntBASIC4.16□□□□□ -1.74
COL1A1P02452 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
COL1A1P02452 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL1A1P02452 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL1A1P02452 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.15□□□□□ -1.74
COL1A1P02452 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
COL1A1P02452 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
COL1A1P02452 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
COL1A1P02452 DDX6P1-205ENST00000441966 1436 ntBASIC4.15□□□□□ -1.74
COL1A1P02452 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.15□□□□□ -1.75
COL1A1P02452 AL357075.1-201ENST00000404107 726 ntBASIC4.15□□□□□ -1.75
COL1A1P02452 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL1A1P02452 AC063979.1-201ENST00000415539 377 ntBASIC4.15□□□□□ -1.75
COL1A1P02452 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.15□□□□□ -1.75
COL1A1P02452 RPS29P31-201ENST00000446147 164 ntBASIC4.15□□□□□ -1.75
COL1A1P02452 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.15□□□□□ -1.75
COL1A1P02452 MRPL35P4-201ENST00000453682 566 ntBASIC4.15□□□□□ -1.75
COL1A1P02452 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.15□□□□□ -1.75
COL1A1P02452 RPL7P38-201ENST00000488396 739 ntBASIC4.15□□□□□ -1.75
COL1A1P02452 AC110794.1-201ENST00000505816 425 ntBASIC4.15□□□□□ -1.75
COL1A1P02452 FCF1P8-201ENST00000510322 597 ntBASIC4.15□□□□□ -1.75
COL1A1P02452 AP000926.4-201ENST00000527351 454 ntBASIC4.15□□□□□ -1.75
COL1A1P02452 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.15□□□□□ -1.75
COL1A1P02452 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL1A1P02452 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.15□□□□□ -1.75
COL1A1P02452 CKS1BP3-201ENST00000600888 237 ntBASIC4.15□□□□□ -1.75
COL1A1P02452 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.15□□□□□ -1.75
COL1A1P02452 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.15□□□□□ -1.75
COL1A1P02452 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
COL1A1P02452 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL1A1P02452 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL1A1P02452 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL1A1P02452 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
COL1A1P02452 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
COL1A1P02452 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL1A1P02452 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
COL1A1P02452 PROS2P-201ENST00000474651 1951 ntBASIC4.14□□□□□ -1.75
COL1A1P02452 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL1A1P02452 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
COL1A1P02452 RSL24D1P1-201ENST00000404972 493 ntBASIC4.14□□□□□ -1.75
COL1A1P02452 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.14□□□□□ -1.75
COL1A1P02452 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.14□□□□□ -1.75
COL1A1P02452 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.14□□□□□ -1.75
COL1A1P02452 MTCO1P45-201ENST00000431457 267 ntBASIC4.14□□□□□ -1.75
COL1A1P02452 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.14□□□□□ -1.75
COL1A1P02452 RPL27AP5-201ENST00000469428 449 ntBASIC4.14□□□□□ -1.75
COL1A1P02452 RPS3AP50-201ENST00000487064 803 ntBASIC4.14□□□□□ -1.75
COL1A1P02452 AC026333.2-201ENST00000542164 106 ntBASIC4.14□□□□□ -1.75
COL1A1P02452 UBE2NP1-201ENST00000545592 458 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms