Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC069285.2-201ENST00000440210 275 ntBASIC4.36□□□□□ -1.71
LDLRP01130 RPS7P5-201ENST00000441482 581 ntBASIC4.36□□□□□ -1.71
LDLRP01130 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.36□□□□□ -1.71
LDLRP01130 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LDLRP01130 RPL23AP56-201ENST00000460778 453 ntBASIC4.36□□□□□ -1.71
LDLRP01130 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.36□□□□□ -1.71
LDLRP01130 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.36□□□□□ -1.71
LDLRP01130 AC079203.1-201ENST00000487972 404 ntBASIC4.36□□□□□ -1.71
LDLRP01130 AC025164.1-201ENST00000496249 478 ntBASIC4.36□□□□□ -1.71
LDLRP01130 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.36□□□□□ -1.71
LDLRP01130 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.36□□□□□ -1.71
LDLRP01130 MTCO3P28-201ENST00000513351 515 ntBASIC4.36□□□□□ -1.71
LDLRP01130 RNA5SP154-201ENST00000516193 111 ntBASIC4.36□□□□□ -1.71
LDLRP01130 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.36□□□□□ -1.71
LDLRP01130 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.36□□□□□ -1.71
LDLRP01130 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LDLRP01130 MRPS36P5-201ENST00000551909 298 ntBASIC4.36□□□□□ -1.71
LDLRP01130 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.36□□□□□ -1.71
LDLRP01130 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.36□□□□□ -1.71
LDLRP01130 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LDLRP01130 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.36□□□□□ -1.71
LDLRP01130 AC090751.1-201ENST00000566966 267 ntBASIC4.36□□□□□ -1.71
LDLRP01130 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.36□□□□□ -1.71
LDLRP01130 MTCO1P40-201ENST00000574371 625 ntBASIC4.36□□□□□ -1.71
LDLRP01130 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.36□□□□□ -1.71
LDLRP01130 EIF1P6-201ENST00000600054 334 ntBASIC4.36□□□□□ -1.71
LDLRP01130 VN1R85P-201ENST00000601587 426 ntBASIC4.36□□□□□ -1.71
LDLRP01130 PSMA6P4-201ENST00000603247 718 ntBASIC4.36□□□□□ -1.71
LDLRP01130 DUXAP3-201ENST00000603616 594 ntBASIC4.36□□□□□ -1.71
LDLRP01130 AC067959.1-201ENST00000604334 379 ntBASIC4.36□□□□□ -1.71
LDLRP01130 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LDLRP01130 AC008785.1-201ENST00000624475 456 ntBASIC4.36□□□□□ -1.71
LDLRP01130 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
LDLRP01130 AC111188.2-201ENST00000529697 1387 ntBASIC4.36□□□□□ -1.71
LDLRP01130 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LDLRP01130 AC009951.1-201ENST00000623674 2614 ntBASIC4.36□□□□□ -1.71
LDLRP01130 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
LDLRP01130 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LDLRP01130 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.35□□□□□ -1.71
LDLRP01130 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
LDLRP01130 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LDLRP01130 RNU1-64P-201ENST00000365443 163 ntBASIC4.35□□□□□ -1.71
LDLRP01130 RNU6-224P-201ENST00000384055 107 ntBASIC4.35□□□□□ -1.71
LDLRP01130 SNORD116-2-201ENST00000384274 95 ntBASIC4.35□□□□□ -1.71
LDLRP01130 SNORD116-6-201ENST00000384711 96 ntBASIC4.35□□□□□ -1.71
LDLRP01130 SNORA11C-201ENST00000408532 129 ntBASIC4.35□□□□□ -1.71
LDLRP01130 MTCO2P21-201ENST00000419780 677 ntBASIC4.35□□□□□ -1.71
LDLRP01130 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.35□□□□□ -1.71
LDLRP01130 MTND5P25-201ENST00000430499 799 ntBASIC4.35□□□□□ -1.71
LDLRP01130 VN1R108P-201ENST00000431580 830 ntBASIC4.35□□□□□ -1.71
LDLRP01130 AC234064.1-201ENST00000436312 247 ntBASIC4.35□□□□□ -1.71
LDLRP01130 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.35□□□□□ -1.71
LDLRP01130 AC002542.1-201ENST00000440683 193 ntBASIC4.35□□□□□ -1.71
LDLRP01130 OR10R1P-201ENST00000441524 1141 ntBASIC4.35□□□□□ -1.71
LDLRP01130 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.35□□□□□ -1.71
LDLRP01130 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.35□□□□□ -1.71
LDLRP01130 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.35□□□□□ -1.71
LDLRP01130 RPS5P7-201ENST00000456664 608 ntBASIC4.35□□□□□ -1.71
LDLRP01130 ZFRP1-201ENST00000457579 2970 ntBASIC4.35□□□□□ -1.71
LDLRP01130 AC096992.1-201ENST00000459808 709 ntBASIC4.35□□□□□ -1.71
LDLRP01130 AC010469.1-201ENST00000463864 576 ntBASIC4.35□□□□□ -1.71
LDLRP01130 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.35□□□□□ -1.71
LDLRP01130 AC091959.2-201ENST00000477363 321 ntBASIC4.35□□□□□ -1.71
LDLRP01130 MTND6P6-201ENST00000478031 263 ntBASIC4.35□□□□□ -1.71
LDLRP01130 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LDLRP01130 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LDLRP01130 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.35□□□□□ -1.71
LDLRP01130 AC020699.1-201ENST00000505161 445 ntBASIC4.35□□□□□ -1.71
LDLRP01130 AC091860.1-201ENST00000505723 432 ntBASIC4.35□□□□□ -1.71
LDLRP01130 AC025674.1-201ENST00000507074 324 ntBASIC4.35□□□□□ -1.71
LDLRP01130 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.35□□□□□ -1.71
LDLRP01130 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.35□□□□□ -1.71
LDLRP01130 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.35□□□□□ -1.71
LDLRP01130 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LDLRP01130 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.35□□□□□ -1.71
LDLRP01130 AC133555.2-201ENST00000550213 292 ntBASIC4.35□□□□□ -1.71
LDLRP01130 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.35□□□□□ -1.71
LDLRP01130 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LDLRP01130 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.35□□□□□ -1.71
LDLRP01130 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.35□□□□□ -1.71
LDLRP01130 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.35□□□□□ -1.71
LDLRP01130 MIR3939-201ENST00000582614 106 ntBASIC4.35□□□□□ -1.71
LDLRP01130 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.35□□□□□ -1.71
LDLRP01130 AC115085.1-201ENST00000588924 229 ntBASIC4.35□□□□□ -1.71
LDLRP01130 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.35□□□□□ -1.71
LDLRP01130 AC080013.6-201ENST00000606185 215 ntBASIC4.35□□□□□ -1.71
LDLRP01130 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
LDLRP01130 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LDLRP01130 AC139792.2-201ENST00000624218 587 ntBASIC4.35□□□□□ -1.71
LDLRP01130 AC017104.5-201ENST00000637647 639 ntBASIC4.35□□□□□ -1.71
LDLRP01130 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.35□□□□□ -1.71
LDLRP01130 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LDLRP01130 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
LDLRP01130 NCLP2-201ENST00000416078 1462 ntBASIC4.35□□□□□ -1.71
LDLRP01130 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LDLRP01130 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.34□□□□□ -1.71
LDLRP01130 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LDLRP01130 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LDLRP01130 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LDLRP01130 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms