Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AL445437.1-201ENST00000623157 3087 ntBASIC4.01□□□□□ -1.77
CTDNEP1O95476 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
CTDNEP1O95476 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.01□□□□□ -1.77
CTDNEP1O95476 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CTDNEP1O95476 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CTDNEP1O95476 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CTDNEP1O95476 AC010329.2-201ENST00000595195 2737 ntBASIC4.01□□□□□ -1.77
CTDNEP1O95476 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4□□□□□ -1.77
CTDNEP1O95476 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CTDNEP1O95476 AL049555.1-201ENST00000562834 1933 ntBASIC4□□□□□ -1.77
CTDNEP1O95476 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CTDNEP1O95476 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
CTDNEP1O95476 RNU1-64P-201ENST00000365443 163 ntBASIC4□□□□□ -1.77
CTDNEP1O95476 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4□□□□□ -1.77
CTDNEP1O95476 AC136624.1-201ENST00000400791 413 ntBASIC4□□□□□ -1.77
CTDNEP1O95476 RSL24D1P1-201ENST00000404972 493 ntBASIC4□□□□□ -1.77
CTDNEP1O95476 AL445189.1-201ENST00000405722 338 ntBASIC4□□□□□ -1.77
CTDNEP1O95476 AL136131.1-201ENST00000406079 803 ntBASIC4□□□□□ -1.77
CTDNEP1O95476 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4□□□□□ -1.77
CTDNEP1O95476 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4□□□□□ -1.77
CTDNEP1O95476 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4□□□□□ -1.77
CTDNEP1O95476 AC018644.1-201ENST00000429934 551 ntBASIC4□□□□□ -1.77
CTDNEP1O95476 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4□□□□□ -1.77
CTDNEP1O95476 RPS15AP29-201ENST00000445539 400 ntBASIC4□□□□□ -1.77
CTDNEP1O95476 AL133547.1-201ENST00000448546 220 ntBASIC4□□□□□ -1.77
CTDNEP1O95476 NDUFS5P3-201ENST00000450668 321 ntBASIC4□□□□□ -1.77
CTDNEP1O95476 IFNWP4-201ENST00000453148 294 ntBASIC4□□□□□ -1.77
CTDNEP1O95476 DEFB109D-201ENST00000529497 240 ntBASIC4□□□□□ -1.77
CTDNEP1O95476 AC103843.2-201ENST00000530523 682 ntBASIC4□□□□□ -1.77
CTDNEP1O95476 AL139174.1-201ENST00000531489 886 ntBASIC4□□□□□ -1.77
CTDNEP1O95476 AC005476.1-201ENST00000554427 397 ntBASIC4□□□□□ -1.77
CTDNEP1O95476 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4□□□□□ -1.77
CTDNEP1O95476 HNRNPCP4-201ENST00000571636 900 ntBASIC4□□□□□ -1.77
CTDNEP1O95476 AC093227.2-201ENST00000589357 285 ntBASIC4□□□□□ -1.77
CTDNEP1O95476 AC017076.1-201ENST00000607613 578 ntBASIC4□□□□□ -1.77
CTDNEP1O95476 AP006248.2-201ENST00000623309 592 ntBASIC4□□□□□ -1.77
CTDNEP1O95476 AC127502.3-201ENST00000636170 1206 ntBASIC4□□□□□ -1.77
CTDNEP1O95476 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4□□□□□ -1.77
CTDNEP1O95476 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4□□□□□ -1.77
CTDNEP1O95476 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4□□□□□ -1.77
CTDNEP1O95476 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CTDNEP1O95476 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.99□□□□□ -1.77
CTDNEP1O95476 RNA5SP197-201ENST00000363357 119 ntBASIC3.99□□□□□ -1.77
CTDNEP1O95476 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTDNEP1O95476 RNU6-55P-201ENST00000411092 107 ntBASIC3.99□□□□□ -1.77
CTDNEP1O95476 RNU6-954P-201ENST00000411355 107 ntBASIC3.99□□□□□ -1.77
CTDNEP1O95476 Z99755.1-201ENST00000414048 380 ntBASIC3.99□□□□□ -1.77
CTDNEP1O95476 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.99□□□□□ -1.77
CTDNEP1O95476 SEC63P1-201ENST00000425785 1258 ntBASIC3.99□□□□□ -1.77
CTDNEP1O95476 RWDD4P2-201ENST00000426392 563 ntBASIC3.99□□□□□ -1.77
CTDNEP1O95476 TPTE2P1-204ENST00000435256 593 ntBASIC3.99□□□□□ -1.77
CTDNEP1O95476 CASP3P1-201ENST00000446037 609 ntBASIC3.99□□□□□ -1.77
CTDNEP1O95476 AL359073.1-201ENST00000448036 403 ntBASIC3.99□□□□□ -1.77
CTDNEP1O95476 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.99□□□□□ -1.77
CTDNEP1O95476 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.99□□□□□ -1.77
CTDNEP1O95476 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.99□□□□□ -1.77
CTDNEP1O95476 AC004801.2-202ENST00000463559 283 ntBASIC3.99□□□□□ -1.77
CTDNEP1O95476 AC037198.2-201ENST00000478845 733 ntBASIC3.99□□□□□ -1.77
CTDNEP1O95476 RWDD4P1-201ENST00000488019 565 ntBASIC3.99□□□□□ -1.77
CTDNEP1O95476 AP000926.3-201ENST00000497201 299 ntBASIC3.99□□□□□ -1.77
CTDNEP1O95476 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.99□□□□□ -1.77
CTDNEP1O95476 SNORA70.19-201ENST00000516717 90 ntBASIC3.99□□□□□ -1.77
CTDNEP1O95476 IGKV2-26-201ENST00000518305 343 ntBASIC3.99□□□□□ -1.77
CTDNEP1O95476 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.99□□□□□ -1.77
CTDNEP1O95476 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.99□□□□□ -1.77
CTDNEP1O95476 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CTDNEP1O95476 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.99□□□□□ -1.77
CTDNEP1O95476 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.99□□□□□ -1.77
CTDNEP1O95476 FAM106CP-201ENST00000582212 507 ntBASIC3.99□□□□□ -1.77
CTDNEP1O95476 AL034408.1-202ENST00000636088 415 ntBASIC3.99□□□□□ -1.77
CTDNEP1O95476 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTDNEP1O95476 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTDNEP1O95476 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.99□□□□□ -1.77
CTDNEP1O95476 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTDNEP1O95476 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CTDNEP1O95476 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CTDNEP1O95476 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 RNU4-35P-201ENST00000362588 141 ntBASIC3.98□□□□□ -1.77
CTDNEP1O95476 RNU6-1279P-201ENST00000383917 103 ntBASIC3.98□□□□□ -1.77
CTDNEP1O95476 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 RNU6ATAC-201ENST00000408749 126 ntBASIC3.98□□□□□ -1.77
CTDNEP1O95476 RN7SKP177-201ENST00000410567 355 ntBASIC3.98□□□□□ -1.77
CTDNEP1O95476 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 TRGV7-201ENST00000427089 353 ntBASIC3.98□□□□□ -1.77
CTDNEP1O95476 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 KCTD10P1-201ENST00000434203 625 ntBASIC3.98□□□□□ -1.77
CTDNEP1O95476 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 AC122718.1-201ENST00000439448 744 ntBASIC3.98□□□□□ -1.77
CTDNEP1O95476 AL157884.3-201ENST00000448273 1184 ntBASIC3.98□□□□□ -1.77
CTDNEP1O95476 AC010401.1-201ENST00000463867 348 ntBASIC3.98□□□□□ -1.77
CTDNEP1O95476 FAM133DP-201ENST00000464802 691 ntBASIC3.98□□□□□ -1.77
CTDNEP1O95476 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 AC026403.1-201ENST00000518938 295 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms