Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC6.44□□□□□ -1.38
RAPGEF3O95398 PIGPP4-201ENST00000584447 307 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RAPGEF3O95398 MRPS35P3-201ENST00000603189 709 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 Z99497.2-201ENST00000603634 310 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.44□□□□□ -1.38
RAPGEF3O95398 AL451049.1-201ENST00000608672 497 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 AL360219.1-201ENST00000610230 366 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 AL442067.2-201ENST00000614033 363 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 AC131159.1-201ENST00000621854 213 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 AC008013.2-202ENST00000637965 364 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 FP325313.1-201ENST00000638228 703 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RAPGEF3O95398 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.44□□□□□ -1.38
RAPGEF3O95398 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RAPGEF3O95398 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
RAPGEF3O95398 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
RAPGEF3O95398 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
RAPGEF3O95398 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RAPGEF3O95398 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.44□□□□□ -1.38
RAPGEF3O95398 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RAPGEF3O95398 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.44□□□□□ -1.38
RAPGEF3O95398 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RAPGEF3O95398 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 FAM133CP-201ENST00000332869 704 ntBASIC6.43□□□□□ -1.38
RAPGEF3O95398 Y_RNA.169-201ENST00000363745 96 ntBASIC6.43□□□□□ -1.38
RAPGEF3O95398 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 U8.11-201ENST00000384699 133 ntBASIC6.43□□□□□ -1.38
RAPGEF3O95398 U8.12-201ENST00000384701 133 ntBASIC6.43□□□□□ -1.38
RAPGEF3O95398 SFR1P1-201ENST00000403720 688 ntBASIC6.43□□□□□ -1.38
RAPGEF3O95398 AL136131.1-201ENST00000406079 803 ntBASIC6.43□□□□□ -1.38
RAPGEF3O95398 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 AC090960.1-201ENST00000421072 306 ntBASIC6.43□□□□□ -1.38
RAPGEF3O95398 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 U8.18-201ENST00000459285 133 ntBASIC6.43□□□□□ -1.38
RAPGEF3O95398 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 MYL12BP2-201ENST00000503948 512 ntBASIC6.43□□□□□ -1.38
RAPGEF3O95398 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 AC006349.1-201ENST00000555526 235 ntBASIC6.43□□□□□ -1.38
RAPGEF3O95398 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 AC074140.1-201ENST00000621617 208 ntBASIC6.43□□□□□ -1.38
RAPGEF3O95398 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 U6.107-201ENST00000637108 79 ntBASIC6.43□□□□□ -1.38
RAPGEF3O95398 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RAPGEF3O95398 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
RAPGEF3O95398 AC140134.1-201ENST00000511830 3544 ntBASIC6.43□□□□□ -1.38
RAPGEF3O95398 BX005019.1-201ENST00000561881 1810 ntBASIC6.43□□□□□ -1.38
RAPGEF3O95398 AC138393.1-206ENST00000540997 1886 ntBASIC6.43□□□□□ -1.38
RAPGEF3O95398 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RAPGEF3O95398 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RAPGEF3O95398 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC6.42□□□□□ -1.38
RAPGEF3O95398 NXPH1-205ENST00000602349 1953 ntBASIC6.42□□□□□ -1.38
RAPGEF3O95398 AC000367.1-201ENST00000452711 1766 ntBASIC6.42□□□□□ -1.38
RAPGEF3O95398 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.42□□□□□ -1.38
RAPGEF3O95398 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.42□□□□□ -1.38
RAPGEF3O95398 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RAPGEF3O95398 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RAPGEF3O95398 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
RAPGEF3O95398 NACA3P-201ENST00000359690 648 ntBASIC6.42□□□□□ -1.38
RAPGEF3O95398 RNU6-83P-201ENST00000384568 112 ntBASIC6.42□□□□□ -1.38
RAPGEF3O95398 OR5AW1P-201ENST00000426334 1006 ntBASIC6.42□□□□□ -1.38
RAPGEF3O95398 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.42□□□□□ -1.38
RAPGEF3O95398 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6.42□□□□□ -1.38
RAPGEF3O95398 RHEBP2-201ENST00000450289 600 ntBASIC6.42□□□□□ -1.38
RAPGEF3O95398 RPL7P48-201ENST00000461513 746 ntBASIC6.42□□□□□ -1.38
RAPGEF3O95398 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.42□□□□□ -1.38
RAPGEF3O95398 PGBD4P4-201ENST00000509673 613 ntBASIC6.42□□□□□ -1.38
RAPGEF3O95398 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC6.42□□□□□ -1.38
RAPGEF3O95398 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.42□□□□□ -1.38
RAPGEF3O95398 MTND2P26-201ENST00000528255 1029 ntBASIC6.42□□□□□ -1.38
RAPGEF3O95398 AP002812.4-201ENST00000532139 286 ntBASIC6.42□□□□□ -1.38
RAPGEF3O95398 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.42□□□□□ -1.38
RAPGEF3O95398 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC6.42□□□□□ -1.38
RAPGEF3O95398 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC6.42□□□□□ -1.38
RAPGEF3O95398 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.42□□□□□ -1.38
RAPGEF3O95398 ZNF415P1-201ENST00000582279 1166 ntBASIC6.42□□□□□ -1.38
RAPGEF3O95398 EIF1P6-201ENST00000600054 334 ntBASIC6.42□□□□□ -1.38
RAPGEF3O95398 AL109653.1-201ENST00000603091 248 ntBASIC6.42□□□□□ -1.38
RAPGEF3O95398 AL133507.1-201ENST00000605269 557 ntBASIC6.42□□□□□ -1.38
RAPGEF3O95398 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.42□□□□□ -1.38
RAPGEF3O95398 AC009090.3-201ENST00000616553 565 ntBASIC6.42□□□□□ -1.38
RAPGEF3O95398 AC009318.3-201ENST00000616916 503 ntBASIC6.42□□□□□ -1.38
RAPGEF3O95398 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC6.42□□□□□ -1.38
RAPGEF3O95398 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RAPGEF3O95398 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.42□□□□□ -1.38
RAPGEF3O95398 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC6.42□□□□□ -1.38
RAPGEF3O95398 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms