Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC091178.1-203ENST00000584586 279 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.25□□□□□ -1.73
NKX2-2O95096 AC133552.5-201ENST00000604266 540 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 AC009220.3-201ENST00000604318 586 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 AC008966.2-201ENST00000606157 453 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 AC092954.1-201ENST00000609121 445 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 AC131238.1-201ENST00000617135 328 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 AC108467.2-201ENST00000617640 1597 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 AC140113.4-201ENST00000622087 222 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 AC005086.4-201ENST00000623065 213 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 AP000843.1-201ENST00000624880 701 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 AC139713.2-215ENST00000641428 5037 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 OR6C71P-202ENST00000641886 1107 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-2O95096 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-2O95096 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
NKX2-2O95096 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
NKX2-2O95096 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-2O95096 AP000776.1-201ENST00000530032 1663 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 ELL2P4-201ENST00000446870 1376 ntBASIC4.25□□□□□ -1.73
NKX2-2O95096 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
NKX2-2O95096 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-2O95096 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.25□□□□□ -1.73
NKX2-2O95096 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-2O95096 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-2O95096 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-2O95096 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-2O95096 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-2O95096 LINC01109-201ENST00000603837 3081 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-2O95096 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-2O95096 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
NKX2-2O95096 AC021146.4-201ENST00000309229 279 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 RNU6-1214P-201ENST00000363650 109 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 RNU6-157P-201ENST00000383957 107 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 RNA5SP397-201ENST00000391323 118 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.24□□□□□ -1.73
NKX2-2O95096 RN7SKP247-201ENST00000411094 308 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.24□□□□□ -1.73
NKX2-2O95096 AC107081.1-201ENST00000414975 361 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 VPS26BP1-201ENST00000417155 755 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 RPS15AP40-201ENST00000419621 391 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 AL139421.1-201ENST00000423010 169 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 SDCBPP2-201ENST00000424643 885 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX2-2O95096 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX2-2O95096 AC008065.1-201ENST00000428525 348 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 AL050321.1-201ENST00000432363 400 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 MTND1P32-201ENST00000433043 938 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX2-2O95096 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX2-2O95096 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX2-2O95096 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX2-2O95096 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX2-2O95096 MTND1P31-201ENST00000449206 961 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.24□□□□□ -1.73
NKX2-2O95096 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.24□□□□□ -1.73
NKX2-2O95096 AC010326.1-201ENST00000462726 602 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 RPL23AP65-201ENST00000475608 468 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 IGLV2-34-201ENST00000490007 283 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.24□□□□□ -1.73
NKX2-2O95096 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
NKX2-2O95096 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX2-2O95096 AC016065.2-201ENST00000514530 444 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX2-2O95096 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX2-2O95096 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX2-2O95096 MTATP6P15-201ENST00000527233 835 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 PDCL2P2-201ENST00000533651 189 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX2-2O95096 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.24□□□□□ -1.73
NKX2-2O95096 HIGD1AP17-201ENST00000554576 276 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 SETP1-201ENST00000556014 845 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX2-2O95096 AC090888.2-201ENST00000559765 1144 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 AGGF1P8-201ENST00000562979 1000 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 AC009094.1-201ENST00000564443 426 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX2-2O95096 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX2-2O95096 RPL7P50-201ENST00000600588 727 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 CLIC4P2-201ENST00000601934 717 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 AL133338.2-201ENST00000604292 736 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 AC121761.2-201ENST00000617300 689 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
NKX2-2O95096 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.24□□□□□ -1.73
NKX2-2O95096 EOGT-210ENST00000615922 1931 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-2O95096 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
NKX2-2O95096 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX2-2O95096 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-2O95096 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-2O95096 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX2-2O95096 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-2O95096 OR14L1P-202ENST00000641545 3009 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 CDR1-202ENST00000625883 1485 ntBASIC4.24□□□□□ -1.73
NKX2-2O95096 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.24□□□□□ -1.73
NKX2-2O95096 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-2O95096 AL672167.1-203ENST00000641299 2975 ntBASIC4.23□□□□□ -1.73
NKX2-2O95096 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.23□□□□□ -1.73
NKX2-2O95096 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms