Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SNX3O60493 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SNX3O60493 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.06□□□□□ -1.76
SNX3O60493 ERCC6-202ENST00000374127 1782 ntBASIC4.06□□□□□ -1.76
SNX3O60493 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.06□□□□□ -1.76
SNX3O60493 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNX3O60493 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SNX3O60493 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.06□□□□□ -1.76
SNX3O60493 MAPK10-373ENST00000641983 6772 ntBASIC4.06□□□□□ -1.76
SNX3O60493 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNX3O60493 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNX3O60493 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNX3O60493 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SNX3O60493 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNX3O60493 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.05□□□□□ -1.76
SNX3O60493 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SNX3O60493 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNX3O60493 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX3O60493 RNU6-224P-201ENST00000384055 107 ntBASIC4.05□□□□□ -1.76
SNX3O60493 RNU6-1293P-201ENST00000384077 107 ntBASIC4.05□□□□□ -1.76
SNX3O60493 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SNX3O60493 AL603766.1-201ENST00000407763 664 ntBASIC4.05□□□□□ -1.76
SNX3O60493 RPL30P2-201ENST00000414021 291 ntBASIC4.05□□□□□ -1.76
SNX3O60493 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX3O60493 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNX3O60493 AC079355.1-201ENST00000421770 223 ntBASIC4.05□□□□□ -1.76
SNX3O60493 CHIAP3-201ENST00000423668 1133 ntBASIC4.05□□□□□ -1.76
SNX3O60493 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.05□□□□□ -1.76
SNX3O60493 AC023347.2-201ENST00000433994 462 ntBASIC4.05□□□□□ -1.76
SNX3O60493 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX3O60493 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX3O60493 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX3O60493 AL009048.1-201ENST00000450437 298 ntBASIC4.05□□□□□ -1.76
SNX3O60493 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX3O60493 RPL36AP13-201ENST00000457490 317 ntBASIC4.05□□□□□ -1.76
SNX3O60493 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.05□□□□□ -1.76
SNX3O60493 TRAV31-201ENST00000502780 342 ntBASIC4.05□□□□□ -1.76
SNX3O60493 RNA5SP73-201ENST00000516744 108 ntBASIC4.05□□□□□ -1.76
SNX3O60493 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.05□□□□□ -1.76
SNX3O60493 RN7SKP96-201ENST00000516948 297 ntBASIC4.05□□□□□ -1.76
SNX3O60493 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX3O60493 NPM1P6-201ENST00000521088 871 ntBASIC4.05□□□□□ -1.76
SNX3O60493 DEFB130C-202ENST00000530001 230 ntBASIC4.05□□□□□ -1.76
SNX3O60493 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNX3O60493 AP001781.1-201ENST00000530977 207 ntBASIC4.05□□□□□ -1.76
SNX3O60493 SERPINE4P-201ENST00000554978 281 ntBASIC4.05□□□□□ -1.76
SNX3O60493 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNX3O60493 AC044913.1-201ENST00000557200 430 ntBASIC4.05□□□□□ -1.76
SNX3O60493 MTCYBP23-201ENST00000558717 1102 ntBASIC4.05□□□□□ -1.76
SNX3O60493 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.05□□□□□ -1.76
SNX3O60493 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX3O60493 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.05□□□□□ -1.76
SNX3O60493 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.05□□□□□ -1.76
SNX3O60493 AL160237.3-201ENST00000604114 1013 ntBASIC4.05□□□□□ -1.76
SNX3O60493 AL392112.1-201ENST00000605115 829 ntBASIC4.05□□□□□ -1.76
SNX3O60493 AC010857.1-201ENST00000606398 594 ntBASIC4.05□□□□□ -1.76
SNX3O60493 AL157392.4-201ENST00000609756 345 ntBASIC4.05□□□□□ -1.76
SNX3O60493 PART1_2.1-201ENST00000612397 250 ntBASIC4.05□□□□□ -1.76
SNX3O60493 AL050303.3-201ENST00000613704 284 ntBASIC4.05□□□□□ -1.76
SNX3O60493 AC022467.1-201ENST00000614738 749 ntBASIC4.05□□□□□ -1.76
SNX3O60493 U7.8-201ENST00000619968 63 ntBASIC4.05□□□□□ -1.76
SNX3O60493 AC123767.1-202ENST00000620407 817 ntBASIC4.05□□□□□ -1.76
SNX3O60493 RNU6-156P-201ENST00000621869 107 ntBASIC4.05□□□□□ -1.76
SNX3O60493 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.05□□□□□ -1.76
SNX3O60493 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNX3O60493 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNX3O60493 AC010300.1-201ENST00000600671 5134 ntBASIC4.05□□□□□ -1.76
SNX3O60493 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNX3O60493 MFSD8-242ENST00000641690 4199 ntBASIC4.05□□□□□ -1.76
SNX3O60493 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNX3O60493 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SNX3O60493 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SNX3O60493 DDX18P3-201ENST00000404856 2007 ntBASIC4.04□□□□□ -1.76
SNX3O60493 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SNX3O60493 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNX3O60493 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SNX3O60493 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.04□□□□□ -1.76
SNX3O60493 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.04□□□□□ -1.76
SNX3O60493 RNU1-87P-201ENST00000363727 170 ntBASIC4.04□□□□□ -1.76
SNX3O60493 RNU6-619P-201ENST00000365146 108 ntBASIC4.04□□□□□ -1.76
SNX3O60493 GSTA8P-201ENST00000404253 637 ntBASIC4.04□□□□□ -1.76
SNX3O60493 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX3O60493 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX3O60493 AC073136.2-201ENST00000417282 849 ntBASIC4.04□□□□□ -1.76
SNX3O60493 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.04□□□□□ -1.76
SNX3O60493 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX3O60493 YWHAZP8-201ENST00000436935 731 ntBASIC4.04□□□□□ -1.76
SNX3O60493 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.04□□□□□ -1.76
SNX3O60493 IFNWP4-201ENST00000453148 294 ntBASIC4.04□□□□□ -1.76
SNX3O60493 MTCO3P16-201ENST00000454456 754 ntBASIC4.04□□□□□ -1.76
SNX3O60493 MTCO3P20-201ENST00000454926 688 ntBASIC4.04□□□□□ -1.76
SNX3O60493 AC018635.1-201ENST00000468292 1030 ntBASIC4.04□□□□□ -1.76
SNX3O60493 AC092324.1-201ENST00000468671 324 ntBASIC4.04□□□□□ -1.76
SNX3O60493 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.04□□□□□ -1.76
SNX3O60493 AC079203.1-201ENST00000487972 404 ntBASIC4.04□□□□□ -1.76
SNX3O60493 AC004069.2-201ENST00000505438 1114 ntBASIC4.04□□□□□ -1.76
SNX3O60493 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.04□□□□□ -1.76
SNX3O60493 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX3O60493 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX3O60493 KRT19P6-201ENST00000510983 209 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms