Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC118465.1-201ENST00000513820 1271 ntBASIC4.07□□□□□ -1.76
PRKNO60260 FABP5P12-201ENST00000515543 389 ntBASIC4.07□□□□□ -1.76
PRKNO60260 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRKNO60260 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.07□□□□□ -1.76
PRKNO60260 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.07□□□□□ -1.76
PRKNO60260 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.07□□□□□ -1.76
PRKNO60260 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.07□□□□□ -1.76
PRKNO60260 AGGF1P6-201ENST00000569213 976 ntBASIC4.07□□□□□ -1.76
PRKNO60260 AL354943.1-201ENST00000572103 781 ntBASIC4.07□□□□□ -1.76
PRKNO60260 AC022662.1-201ENST00000580252 331 ntBASIC4.07□□□□□ -1.76
PRKNO60260 MIR3138-201ENST00000585238 82 ntBASIC4.07□□□□□ -1.76
PRKNO60260 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.07□□□□□ -1.76
PRKNO60260 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.07□□□□□ -1.76
PRKNO60260 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.07□□□□□ -1.76
PRKNO60260 AC079587.1-201ENST00000603846 277 ntBASIC4.07□□□□□ -1.76
PRKNO60260 AC113403.1-201ENST00000604910 193 ntBASIC4.07□□□□□ -1.76
PRKNO60260 ARF4P1-201ENST00000605447 541 ntBASIC4.07□□□□□ -1.76
PRKNO60260 AC105227.2-201ENST00000615075 605 ntBASIC4.07□□□□□ -1.76
PRKNO60260 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.07□□□□□ -1.76
PRKNO60260 AC131159.1-201ENST00000621854 213 ntBASIC4.07□□□□□ -1.76
PRKNO60260 AL157770.1-201ENST00000623049 439 ntBASIC4.07□□□□□ -1.76
PRKNO60260 AP000843.1-201ENST00000624880 701 ntBASIC4.07□□□□□ -1.76
PRKNO60260 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PRKNO60260 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PRKNO60260 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRKNO60260 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRKNO60260 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
PRKNO60260 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.07□□□□□ -1.76
PRKNO60260 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRKNO60260 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRKNO60260 AC083843.3-201ENST00000623679 2186 ntBASIC4.07□□□□□ -1.76
PRKNO60260 LINC01355-201ENST00000566551 5444 ntBASIC4.07□□□□□ -1.76
PRKNO60260 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRKNO60260 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRKNO60260 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.06□□□□□ -1.76
PRKNO60260 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
PRKNO60260 AC006042.3-201ENST00000454684 1469 ntBASIC4.06□□□□□ -1.76
PRKNO60260 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRKNO60260 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRKNO60260 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PRKNO60260 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRKNO60260 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.06□□□□□ -1.76
PRKNO60260 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
PRKNO60260 FAM133CP-201ENST00000332869 704 ntBASIC4.06□□□□□ -1.76
PRKNO60260 OR52E6-202ENST00000379946 954 ntBASIC4.06□□□□□ -1.76
PRKNO60260 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PRKNO60260 MIR195-201ENST00000385194 87 ntBASIC4.06□□□□□ -1.76
PRKNO60260 AC093719.1-202ENST00000392735 373 ntBASIC4.06□□□□□ -1.76
PRKNO60260 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRKNO60260 MTND2P18-201ENST00000419962 1030 ntBASIC4.06□□□□□ -1.76
PRKNO60260 AL009174.1-201ENST00000426577 416 ntBASIC4.06□□□□□ -1.76
PRKNO60260 MTCO1P3-201ENST00000429327 192 ntBASIC4.06□□□□□ -1.76
PRKNO60260 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.06□□□□□ -1.76
PRKNO60260 RPL21P110-201ENST00000433345 446 ntBASIC4.06□□□□□ -1.76
PRKNO60260 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.06□□□□□ -1.76
PRKNO60260 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.06□□□□□ -1.76
PRKNO60260 AL008629.1-201ENST00000438615 184 ntBASIC4.06□□□□□ -1.76
PRKNO60260 MTND6P18-201ENST00000439477 513 ntBASIC4.06□□□□□ -1.76
PRKNO60260 AC114495.1-201ENST00000441274 436 ntBASIC4.06□□□□□ -1.76
PRKNO60260 RPS7P5-201ENST00000441482 581 ntBASIC4.06□□□□□ -1.76
PRKNO60260 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.06□□□□□ -1.76
PRKNO60260 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.06□□□□□ -1.76
PRKNO60260 HMGB1P48-201ENST00000446155 598 ntBASIC4.06□□□□□ -1.76
PRKNO60260 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.06□□□□□ -1.76
PRKNO60260 DDX39BP2-208ENST00000453923 258 ntBASIC4.06□□□□□ -1.76
PRKNO60260 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.06□□□□□ -1.76
PRKNO60260 ATG12P2-201ENST00000456830 416 ntBASIC4.06□□□□□ -1.76
PRKNO60260 AL122001.1-201ENST00000457027 370 ntBASIC4.06□□□□□ -1.76
PRKNO60260 RPL21P6-201ENST00000479171 504 ntBASIC4.06□□□□□ -1.76
PRKNO60260 IGBP1P5-201ENST00000507524 1000 ntBASIC4.06□□□□□ -1.76
PRKNO60260 AC118282.2-201ENST00000508739 374 ntBASIC4.06□□□□□ -1.76
PRKNO60260 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.06□□□□□ -1.76
PRKNO60260 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.06□□□□□ -1.76
PRKNO60260 RN7SKP46-201ENST00000515942 234 ntBASIC4.06□□□□□ -1.76
PRKNO60260 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.06□□□□□ -1.76
PRKNO60260 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.06□□□□□ -1.76
PRKNO60260 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRKNO60260 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.06□□□□□ -1.76
PRKNO60260 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.06□□□□□ -1.76
PRKNO60260 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.06□□□□□ -1.76
PRKNO60260 AC090751.1-201ENST00000566966 267 ntBASIC4.06□□□□□ -1.76
PRKNO60260 AC023575.1-201ENST00000580510 358 ntBASIC4.06□□□□□ -1.76
PRKNO60260 HMGB2P1-201ENST00000591146 634 ntBASIC4.06□□□□□ -1.76
PRKNO60260 MRPS35P3-201ENST00000603189 709 ntBASIC4.06□□□□□ -1.76
PRKNO60260 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
PRKNO60260 AL133507.1-201ENST00000605269 557 ntBASIC4.06□□□□□ -1.76
PRKNO60260 AC107075.1-201ENST00000613695 314 ntBASIC4.06□□□□□ -1.76
PRKNO60260 uc_338.13-201ENST00000618243 179 ntBASIC4.06□□□□□ -1.76
PRKNO60260 AF001550.2-201ENST00000636643 217 ntBASIC4.06□□□□□ -1.76
PRKNO60260 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRKNO60260 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRKNO60260 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.06□□□□□ -1.76
PRKNO60260 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRKNO60260 AP005901.5-201ENST00000545779 1796 ntBASIC4.06□□□□□ -1.76
PRKNO60260 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.06□□□□□ -1.76
PRKNO60260 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.06□□□□□ -1.76
PRKNO60260 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PRKNO60260 DDX18P3-201ENST00000404856 2007 ntBASIC4.05□□□□□ -1.76
PRKNO60260 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PRKNO60260 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms