Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AL121877.1-201ENST00000453704 622 ntBASIC4.14□□□□□ -1.75
MSH4O15457 AC005229.2-201ENST00000456995 399 ntBASIC4.14□□□□□ -1.75
MSH4O15457 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.14□□□□□ -1.75
MSH4O15457 AC018635.1-201ENST00000468292 1030 ntBASIC4.14□□□□□ -1.75
MSH4O15457 CCDC75P1-201ENST00000469247 791 ntBASIC4.14□□□□□ -1.75
MSH4O15457 AC006511.1-201ENST00000470614 315 ntBASIC4.14□□□□□ -1.75
MSH4O15457 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.14□□□□□ -1.75
MSH4O15457 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.14□□□□□ -1.75
MSH4O15457 RNU6-1004P-201ENST00000516584 111 ntBASIC4.14□□□□□ -1.75
MSH4O15457 RN7SKP209-201ENST00000516888 304 ntBASIC4.14□□□□□ -1.75
MSH4O15457 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.14□□□□□ -1.75
MSH4O15457 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.14□□□□□ -1.75
MSH4O15457 NOP56P3-201ENST00000549457 385 ntBASIC4.14□□□□□ -1.75
MSH4O15457 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.14□□□□□ -1.75
MSH4O15457 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.14□□□□□ -1.75
MSH4O15457 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MSH4O15457 AC011472.4-201ENST00000615848 491 ntBASIC4.14□□□□□ -1.75
MSH4O15457 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.14□□□□□ -1.75
MSH4O15457 AL118508.4-201ENST00000624142 1176 ntBASIC4.14□□□□□ -1.75
MSH4O15457 AL034408.1-202ENST00000636088 415 ntBASIC4.14□□□□□ -1.75
MSH4O15457 AC009229.4-201ENST00000623854 1947 ntBASIC4.14□□□□□ -1.75
MSH4O15457 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
MSH4O15457 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MSH4O15457 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
MSH4O15457 AC009501.3-201ENST00000605001 1352 ntBASIC4.14□□□□□ -1.75
MSH4O15457 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.13□□□□□ -1.75
MSH4O15457 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MSH4O15457 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
MSH4O15457 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MSH4O15457 MIR92A2-201ENST00000385299 75 ntBASIC4.13□□□□□ -1.75
MSH4O15457 RNU6-603P-201ENST00000411403 107 ntBASIC4.13□□□□□ -1.75
MSH4O15457 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.13□□□□□ -1.75
MSH4O15457 HMGB3P20-201ENST00000417997 600 ntBASIC4.13□□□□□ -1.75
MSH4O15457 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.13□□□□□ -1.75
MSH4O15457 MTND2P11-201ENST00000423638 648 ntBASIC4.13□□□□□ -1.75
MSH4O15457 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.13□□□□□ -1.75
MSH4O15457 RPS3AP46-201ENST00000448352 682 ntBASIC4.13□□□□□ -1.75
MSH4O15457 MTND2P25-201ENST00000449028 610 ntBASIC4.13□□□□□ -1.75
MSH4O15457 MTND2P3-201ENST00000452458 470 ntBASIC4.13□□□□□ -1.75
MSH4O15457 TPRKBP1-201ENST00000456243 481 ntBASIC4.13□□□□□ -1.75
MSH4O15457 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.13□□□□□ -1.75
MSH4O15457 AC025181.1-201ENST00000477507 416 ntBASIC4.13□□□□□ -1.75
MSH4O15457 AC107398.1-201ENST00000486904 505 ntBASIC4.13□□□□□ -1.75
MSH4O15457 AP002812.1-201ENST00000495378 474 ntBASIC4.13□□□□□ -1.75
MSH4O15457 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.13□□□□□ -1.75
MSH4O15457 SLC25A15P5-201ENST00000508033 253 ntBASIC4.13□□□□□ -1.75
MSH4O15457 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.13□□□□□ -1.75
MSH4O15457 AC104619.4-201ENST00000510773 249 ntBASIC4.13□□□□□ -1.75
MSH4O15457 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.13□□□□□ -1.75
MSH4O15457 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.13□□□□□ -1.75
MSH4O15457 AC026403.1-201ENST00000518938 295 ntBASIC4.13□□□□□ -1.75
MSH4O15457 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.13□□□□□ -1.75
MSH4O15457 AL049870.4-201ENST00000555741 486 ntBASIC4.13□□□□□ -1.75
MSH4O15457 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.13□□□□□ -1.75
MSH4O15457 AC018552.3-201ENST00000567416 561 ntBASIC4.13□□□□□ -1.75
MSH4O15457 MIR4429-201ENST00000580105 73 ntBASIC4.13□□□□□ -1.75
MSH4O15457 PSMA6P4-201ENST00000603247 718 ntBASIC4.13□□□□□ -1.75
MSH4O15457 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.13□□□□□ -1.75
MSH4O15457 AC116447.1-201ENST00000613153 453 ntBASIC4.13□□□□□ -1.75
MSH4O15457 AC016957.2-201ENST00000616998 848 ntBASIC4.13□□□□□ -1.75
MSH4O15457 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.13□□□□□ -1.75
MSH4O15457 AC007823.1-201ENST00000569932 1566 ntBASIC4.13□□□□□ -1.75
MSH4O15457 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.13□□□□□ -1.75
MSH4O15457 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.13□□□□□ -1.75
MSH4O15457 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MSH4O15457 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MSH4O15457 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
MSH4O15457 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.12□□□□□ -1.75
MSH4O15457 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MSH4O15457 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
MSH4O15457 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MSH4O15457 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
MSH4O15457 HMGN2P8-201ENST00000391458 268 ntBASIC4.12□□□□□ -1.75
MSH4O15457 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MSH4O15457 ATP5F1P4-201ENST00000397288 746 ntBASIC4.12□□□□□ -1.75
MSH4O15457 HSPE1P8-201ENST00000406997 288 ntBASIC4.12□□□□□ -1.75
MSH4O15457 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.12□□□□□ -1.75
MSH4O15457 BMS1P19-201ENST00000433925 393 ntBASIC4.12□□□□□ -1.75
MSH4O15457 EIF4A1P11-201ENST00000451239 222 ntBASIC4.12□□□□□ -1.75
MSH4O15457 HMGB1P26-201ENST00000452520 628 ntBASIC4.12□□□□□ -1.75
MSH4O15457 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.12□□□□□ -1.75
MSH4O15457 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MSH4O15457 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.12□□□□□ -1.75
MSH4O15457 RPL7P48-201ENST00000461513 746 ntBASIC4.12□□□□□ -1.75
MSH4O15457 AC091564.1-201ENST00000464563 479 ntBASIC4.12□□□□□ -1.75
MSH4O15457 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.12□□□□□ -1.75
MSH4O15457 OR9N1P-202ENST00000494289 481 ntBASIC4.12□□□□□ -1.75
MSH4O15457 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.12□□□□□ -1.75
MSH4O15457 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.12□□□□□ -1.75
MSH4O15457 AC092747.2-201ENST00000545069 983 ntBASIC4.12□□□□□ -1.75
MSH4O15457 AL121766.1-201ENST00000547436 487 ntBASIC4.12□□□□□ -1.75
MSH4O15457 AC023161.2-201ENST00000551218 780 ntBASIC4.12□□□□□ -1.75
MSH4O15457 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.12□□□□□ -1.75
MSH4O15457 MIR4444-1-201ENST00000581696 74 ntBASIC4.12□□□□□ -1.75
MSH4O15457 MIR4444-2-201ENST00000584390 74 ntBASIC4.12□□□□□ -1.75
MSH4O15457 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.12□□□□□ -1.75
MSH4O15457 AC090525.3-201ENST00000605601 189 ntBASIC4.12□□□□□ -1.75
MSH4O15457 MIR92B-201ENST00000607575 96 ntBASIC4.12□□□□□ -1.75
MSH4O15457 AC007342.8-201ENST00000623278 678 ntBASIC4.12□□□□□ -1.75
MSH4O15457 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms