Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC022968.1-201ENST00000567372 442 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC087499.8-201ENST00000578406 226 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL034351.1-201ENST00000605288 668 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AP000255.1-201ENST00000610276 676 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC124312.6-202ENST00000623624 418 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL118508.4-201ENST00000624142 1176 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 CR381670.1-201ENST00000624291 1693 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC011155.1-201ENST00000316512 456 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 RNU6-386P-201ENST00000362650 107 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 RNA5SP399-201ENST00000364003 117 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 U1.1-201ENST00000384101 164 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 RNU6-761P-201ENST00000384148 107 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 USP9YP19-201ENST00000412165 485 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL512504.1-201ENST00000415494 778 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL392003.1-201ENST00000434394 243 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 SETD6P1-201ENST00000444575 317 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC243772.1-201ENST00000451620 410 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL133162.1-201ENST00000463228 453 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 RN7SKP18-201ENST00000516005 275 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 IGKV2D-19-201ENST00000523346 262 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC135001.1-201ENST00000544546 283 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL121839.1-201ENST00000556233 1185 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 SRGNP1-201ENST00000603392 451 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 KATNBL1P1-201ENST00000605192 748 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC110741.2-201ENST00000605278 268 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 U3.45-201ENST00000607547 219 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 uc_338.32-201ENST00000615087 172 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL590410.1-201ENST00000617925 333 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC015967.1-201ENST00000619893 476 ntBASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TMX2-CTNND1H3BSU7 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 RNU6-618P-201ENST00000363518 112 ntBASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 RPL17P50-201ENST00000396131 546 ntBASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL035423.1-201ENST00000420331 213 ntBASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 OR6K4P-201ENST00000423179 955 ntBASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 FAM204CP-201ENST00000424489 642 ntBASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 MTCO1P57-201ENST00000432182 261 ntBASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 MRPS33P4-201ENST00000434892 317 ntBASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 HMGB1P37-201ENST00000439613 609 ntBASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 C1DP3-201ENST00000455013 423 ntBASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC110768.1-201ENST00000509222 400 ntBASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 SNORA70.17-201ENST00000516449 133 ntBASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 IGHV3-32-201ENST00000519182 355 ntBASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 OR8I1P-201ENST00000529291 931 ntBASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 SNORD39.2-201ENST00000579995 76 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms