Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RN7SL323P-201ENST00000494712 295 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AC108941.1-201ENST00000502853 530 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AC092593.2-201ENST00000513866 913 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 SUMO2P20-201ENST00000520803 283 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AC093331.1-201ENST00000521474 169 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AP001636.2-201ENST00000525517 696 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 MTND5P21-201ENST00000531961 522 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AC011816.2-201ENST00000607089 556 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 MIR6875-201ENST00000617506 72 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 MIR6810-201ENST00000622701 70 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AC091905.1-201ENST00000624400 311 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 SEPT7P2-202ENST00000398921 823 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AL391417.1-201ENST00000404100 426 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 SNORA3.3-201ENST00000408712 125 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 RN7SKP263-201ENST00000411194 309 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 HIGD1AP12-201ENST00000427832 281 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AL138799.3-201ENST00000438968 350 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 TXNP1-201ENST00000441872 371 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AC069277.2-201ENST00000454211 432 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 SNRPGP3-201ENST00000469405 227 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AP000893.1-201ENST00000474462 794 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 RN7SL132P-201ENST00000478131 296 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AC005912.1-201ENST00000495392 255 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AL139099.1-201ENST00000497398 403 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 UBE2CP3-201ENST00000502715 450 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AC025260.1-201ENST00000548858 430 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AP005901.4-201ENST00000577336 569 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AL713998.2-201ENST00000604538 1198 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AC115621.1-201ENST00000604653 858 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AC090912.3-201ENST00000609775 533 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AC005344.1-201ENST00000613391 459 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AC138649.5-201ENST00000637456 137 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 USP8P1-201ENST00000494673 3183 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 GABPAP-201ENST00000419271 1356 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 AC000367.1-201ENST00000452711 1766 ntBASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DRB4X5D2U9 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 RNA5SP167-201ENST00000365461 116 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 PTMAP5-201ENST00000393073 333 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 AC010740.1-201ENST00000417035 684 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 AC091390.1-201ENST00000433904 331 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 MTCO1P52-201ENST00000433928 531 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 AC006480.1-201ENST00000449887 378 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 TMED11P-201ENST00000479478 690 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 TRBV12-2-201ENST00000489763 344 ntBASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DRB4X5D2U9 PRELID3BP5-201ENST00000508612 460 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms