Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.8□□□□□ -2.12
LINC01558Q9Y6Z2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.8□□□□□ -2.12
LINC01558Q9Y6Z2 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC1.8□□□□□ -2.12
LINC01558Q9Y6Z2 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 MIR331-201ENST00000362302 94 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 RNA5SP510-201ENST00000364697 99 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AL583835.1-201ENST00000399570 407 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AC009804.1-201ENST00000400949 179 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 HMGN2P35-201ENST00000412164 270 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 ATG3P1-201ENST00000419507 911 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AC023128.2-201ENST00000420880 1223 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 RPEP4-201ENST00000437636 602 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AC112498.1-201ENST00000444401 332 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 RPL29P29-201ENST00000448725 423 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 RPL21P10-201ENST00000463521 490 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AC010618.1-201ENST00000469924 477 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 GAPDHP36-201ENST00000480688 918 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 VN1R105P-201ENST00000486595 910 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 RPL21P131-201ENST00000497298 483 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 KRTAP5-14P-201ENST00000502328 121 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AC093755.1-201ENST00000512950 1023 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AP001207.2-201ENST00000519490 539 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 CASP1P2-201ENST00000526830 1258 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AC091516.1-201ENST00000549191 703 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 LYZ-203ENST00000549690 669 ntTSL 2 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AC125611.2-201ENST00000551907 647 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 RN7SL657P-201ENST00000582431 293 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AL353807.4-201ENST00000604995 257 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AC015849.6-201ENST00000605454 474 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AL133243.1-201ENST00000614487 366 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 MIR6721-201ENST00000617181 87 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AC091046.2-201ENST00000620775 665 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 ASB8-218ENST00000629941 278 ntTSL 5 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 LINC01739-205ENST00000641890 573 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AL136520.1-201ENST00000600311 1322 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AC006378.2-201ENST00000623178 2476 ntBASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LINC01558Q9Y6Z2 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 AC116096.1-201ENST00000566804 2314 ntBASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 LARP1BP1-201ENST00000506036 1359 ntBASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 OR5P1P-201ENST00000299512 925 ntBASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 AC226101.1-201ENST00000401483 387 ntBASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 IL6-206ENST00000407492 926 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 RNA5SP129-201ENST00000410276 118 ntBASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 AC109780.2-201ENST00000413467 845 ntBASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 KCTD10P1-201ENST00000434203 625 ntBASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 LINC00328-2P-201ENST00000436585 219 ntBASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 AC007790.1-201ENST00000439081 782 ntBASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 HMGB3P6-201ENST00000444896 598 ntBASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 UBBP3-201ENST00000445497 241 ntBASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 AL356390.1-201ENST00000455684 397 ntBASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 AC092324.1-201ENST00000468671 324 ntBASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 AP004217.1-201ENST00000480579 346 ntBASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 RN7SL184P-201ENST00000488308 297 ntBASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 RN7SL101P-201ENST00000496350 279 ntBASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 SETP14-201ENST00000497538 873 ntBASIC1.78□□□□□ -2.12
LINC01558Q9Y6Z2 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms