Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC018926.1-201ENST00000616335 435 ntBASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AP000943.4-201ENST00000622912 357 ntBASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AC016588.2-201ENST00000632484 3021 ntBASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AL136964.1-201ENST00000622038 2990 ntBASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 MFSD8-220ENST00000641243 1422 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 ZNF33CP-201ENST00000432492 2030 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 LARP1BP1-201ENST00000506036 1359 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 MIR383-201ENST00000362257 73 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 RN7SKP182-201ENST00000410772 298 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 NPM1P34-201ENST00000428821 893 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 COX6B1P7-201ENST00000430845 235 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 BTF3P10-201ENST00000433415 495 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AC092170.1-201ENST00000440211 356 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AL158053.1-201ENST00000441503 453 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 HMGN1P5-201ENST00000448591 263 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AL096803.2-201ENST00000450032 677 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 MRPL35P4-201ENST00000453682 566 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AC008280.2-201ENST00000455473 307 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 GTF2IP12-201ENST00000456547 356 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AC103987.1-201ENST00000473394 348 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AC068587.1-201ENST00000483613 781 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AC005351.1-201ENST00000511152 786 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AC099522.1-202ENST00000514718 367 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 RN7SKP96-201ENST00000516948 297 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 MRPL49P2-201ENST00000521066 465 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AP003730.1-201ENST00000524605 285 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 DEFB109D-201ENST00000529497 240 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AC105233.3-201ENST00000531125 744 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AC069240.1-201ENST00000548774 375 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AC022655.2-201ENST00000577280 318 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 MIR4458-201ENST00000578872 75 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AC021851.1-201ENST00000608537 1082 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AC106858.1-201ENST00000637497 429 ntBASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
ATG4BQ9Y4P1 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AC005261.4-201ENST00000600047 1385 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 RNU6-354P-201ENST00000383862 107 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 RNU6-1279P-201ENST00000383917 103 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 RNU6-610P-201ENST00000384264 107 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AL603766.1-201ENST00000407763 664 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 RNA5SP104-201ENST00000410989 118 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 RPL23AP38-201ENST00000423801 469 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 DEFB130D-201ENST00000426866 237 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 RPL7P4-203ENST00000430239 730 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 RPL37P1-201ENST00000432310 284 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 RPL23AP46-201ENST00000438548 490 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AL096829.2-201ENST00000446582 742 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 RPS20P21-201ENST00000466859 343 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 RN7SL585P-201ENST00000470538 280 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 TPT1P3-201ENST00000492841 512 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 HPRT1P2-201ENST00000505250 544 ntBASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.94□□□□□ -1.78
ATG4BQ9Y4P1 AC110792.2-201ENST00000510278 224 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms