Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 AC012417.1-201ENST00000582307 1039 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 AC018618.2-201ENST00000604770 446 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 AC015849.2-201ENST00000605738 409 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 AC128687.2-201ENST00000609657 566 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 USP8P1-201ENST00000494673 3183 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 AP001148.1-201ENST00000624124 2359 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 AC116667.1-201ENST00000604855 2072 ntBASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RHBDD3Q9Y3P4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 LARP1BP1-201ENST00000506036 1359 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 AF127577.6-201ENST00000623352 2191 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 SEPT7P7-201ENST00000420492 1301 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 RAD1P1-201ENST00000231383 813 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 SNORD35B-201ENST00000363660 87 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 SNORA7.2-201ENST00000364446 145 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 RNU1-89P-201ENST00000384592 164 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 MIR142-201ENST00000384835 87 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 ZNF603P-201ENST00000405613 487 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 RPL18P10-201ENST00000425606 538 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 OR4F13P-201ENST00000428478 931 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 HMGB3P5-201ENST00000428894 612 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 RPL21P112-201ENST00000434403 463 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 AC006463.2-201ENST00000473326 348 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 RN7SL481P-201ENST00000477764 299 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 AC126121.1-201ENST00000482313 553 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 AC105137.1-201ENST00000484355 562 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 RPL7P47-201ENST00000497299 556 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 AL035404.1-201ENST00000497982 568 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 AC034205.1-201ENST00000520621 638 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 AC092851.1-201ENST00000535964 478 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 AC090312.2-201ENST00000582687 378 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 MIR3138-201ENST00000585238 82 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 AC112230.1-201ENST00000604342 547 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 AL451044.1-201ENST00000604867 238 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 ARF4P1-201ENST00000605447 541 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 AC090425.2-201ENST00000608818 501 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 MIR7641-1-201ENST00000627518 61 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 AL353746.1-201ENST00000566293 6881 ntBASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDD3Q9Y3P4 AC005261.4-201ENST00000600047 1385 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 RNU6-1293P-201ENST00000384077 107 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AL138878.1-201ENST00000405131 347 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 MIR1250-201ENST00000408098 113 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AC234779.1-201ENST00000425910 285 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 USP12PY-201ENST00000427677 1064 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 RPL7P4-203ENST00000430239 730 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AL358472.1-201ENST00000431295 329 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms