Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 FTH1P11-201ENST00000517577 551 ntBASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 AC007225.2-201ENST00000562529 256 ntBASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 AP001180.3-201ENST00000582221 145 ntBASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 MIR544B-201ENST00000582372 78 ntBASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 SUGT1P3-202ENST00000604259 383 ntBASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 AC068944.2-201ENST00000610373 403 ntBASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 AC022467.1-201ENST00000614738 749 ntBASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 AC025588.4-201ENST00000615802 908 ntBASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 MIR6886-201ENST00000619864 61 ntBASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 SEPT14P19-203ENST00000633205 211 ntBASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 AC079776.5-201ENST00000641920 211 ntBASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM39Q9HCM9 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 RNU6-289P-201ENST00000364093 107 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC009804.1-201ENST00000400949 179 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AL391361.1-201ENST00000405580 489 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 TPMTP2-201ENST00000414372 726 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC244505.5-201ENST00000443639 207 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC002553.2-201ENST00000453217 340 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC018638.3-201ENST00000461273 132 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AL133445.1-201ENST00000467051 452 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 PABPC1P3-201ENST00000469174 459 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC023424.2-201ENST00000493479 777 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 KCTD9P2-201ENST00000512203 1013 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC022861.1-201ENST00000522981 663 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 OR5AP1P-201ENST00000529730 940 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC022878.1-201ENST00000530684 149 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 ZNF519P2-201ENST00000557032 169 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC018552.3-201ENST00000567416 561 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC137800.2-201ENST00000574375 120 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 MIR5697-201ENST00000578045 78 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AP005403.1-201ENST00000579720 229 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 MIR4307-201ENST00000582802 84 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 TPMTP1-201ENST00000592307 737 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC112191.3-201ENST00000604371 277 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AL022154.1-201ENST00000604698 785 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC000068.2-201ENST00000608816 460 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC103710.1-201ENST00000610003 901 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 Z95327.3-201ENST00000610385 572 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC109309.2-201ENST00000612597 332 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC013476.2-201ENST00000614456 459 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC008250.2-201ENST00000615261 205 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AP001005.3-201ENST00000622049 129 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC095031.1-201ENST00000623685 672 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 AC011978.2-201ENST00000569835 2054 ntBASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM39Q9HCM9 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
TRIM39Q9HCM9 ANKRD36BP1-202ENST00000604892 1417 ntBASIC5.41□□□□□ -1.54
TRIM39Q9HCM9 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM39Q9HCM9 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM39Q9HCM9 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRIM39Q9HCM9 HSPA8P18-201ENST00000439846 1928 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms