Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 RPL21P103-201ENST00000479921 488 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 RPS4XP14-201ENST00000493072 781 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC108022.1-201ENST00000493466 478 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 RN7SL808P-201ENST00000496066 299 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC091951.3-201ENST00000504093 246 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 SCARNA21.2-201ENST00000516600 166 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AP001880.2-201ENST00000538233 448 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 LRRC34P1-201ENST00000542742 915 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 PCNPP1-201ENST00000552501 511 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AL110118.1-201ENST00000553543 400 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 RPL21P7-201ENST00000557463 483 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC105129.1-201ENST00000560250 297 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 ATP5J2P6-201ENST00000565203 266 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 RN7SL652P-201ENST00000577769 300 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 MIR3667-201ENST00000581025 74 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AP001180.3-201ENST00000582221 145 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 LLPHP1-201ENST00000603571 367 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC005332.6-201ENST00000613178 446 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC079395.3-201ENST00000615161 484 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 LINC00901.1-201ENST00000617252 152 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC098679.5-201ENST00000624394 571 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 MKKS-204ENST00000639674 192 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
BRF2Q9HAW0 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.46□□□□□ -1.7
BRF2Q9HAW0 AC117529.2-201ENST00000512159 2068 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 SDAD1P1-202ENST00000524156 2051 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AL592182.3-201ENST00000642132 3304 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 RNU6-984P-201ENST00000363236 109 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 RNU6-560P-201ENST00000364007 108 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 RNU4-28P-201ENST00000364739 141 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 MIR105-2-201ENST00000385083 81 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AL023807.1-201ENST00000407932 359 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AC073264.1-201ENST00000411508 416 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 NRBF2P2-201ENST00000413087 861 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AL136133.1-201ENST00000413694 376 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 SKP1P3-201ENST00000429280 487 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AC005345.1-201ENST00000431868 217 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 MTCO1P48-201ENST00000448024 1096 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AC108463.1-201ENST00000450258 347 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 RFC5P1-201ENST00000454419 874 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 TRBV26-201ENST00000456572 344 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 MTCO3P2-201ENST00000457365 171 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 RPL5P24-201ENST00000463742 885 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 RPL37P6-202ENST00000464216 403 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AC010301.1-201ENST00000473936 355 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 GAPDHP36-201ENST00000480688 918 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 RPL36AP41-201ENST00000493820 306 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AC112673.1-201ENST00000513168 575 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AC016065.2-201ENST00000514530 444 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 RN7SKP276-201ENST00000516242 268 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 SNORA48.10-201ENST00000516965 160 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 ZNF705CP-201ENST00000530515 889 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 SULT1C2P1-202ENST00000562418 459 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms