Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.77□□□□□ -1.49
FOXP3Q9BZS1 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
FOXP3Q9BZS1 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
FOXP3Q9BZS1 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
FOXP3Q9BZS1 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
FOXP3Q9BZS1 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
FOXP3Q9BZS1 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
FOXP3Q9BZS1 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AC107021.2-201ENST00000567714 2095 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AC004158.1-201ENST00000564508 4319 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 OR9K1P-202ENST00000641111 3217 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 Y_RNA.160-201ENST00000363677 92 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 Y_RNA.263-201ENST00000364659 114 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 RNU2-65P-201ENST00000410162 185 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 RNU4-55P-201ENST00000410731 137 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 RN7SKP293-201ENST00000411389 296 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AL357752.1-201ENST00000412817 349 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 BX510359.3-201ENST00000422168 306 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 MTCO1P20-201ENST00000425366 358 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 GAPDHP17-201ENST00000449858 1001 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AZGP1P2-201ENST00000454506 345 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 ACTR3P3-201ENST00000480448 893 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 RPS29P25-201ENST00000481709 171 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 RPS3AP14-201ENST00000483907 780 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 HMGN1P12-201ENST00000499125 195 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 ATP5LP3-201ENST00000514223 304 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 MTND5P4-201ENST00000514978 288 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AC068587.4-201ENST00000533893 186 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AC123904.3-201ENST00000547218 814 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AC093519.1-201ENST00000566109 298 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AC010680.3-201ENST00000604215 520 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AL451049.1-201ENST00000608672 497 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AC103710.4-201ENST00000609301 899 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 MIR7973-1-201ENST00000614683 76 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AC112204.3-201ENST00000623822 332 ntBASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
FOXP3Q9BZS1 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 ASNSP1-204ENST00000641977 1664 ntBASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 MIR506-201ENST00000384998 124 ntBASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 RPS3AP36-201ENST00000398190 775 ntBASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 AC113412.1-201ENST00000425840 504 ntBASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 AL158073.1-201ENST00000426848 1104 ntBASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 HMGN2P27-201ENST00000427352 270 ntBASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 HMGB3P10-201ENST00000434734 572 ntBASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 RN7SL72P-201ENST00000460697 269 ntBASIC5.75□□□□□ -1.49
FOXP3Q9BZS1 AC092757.1-201ENST00000467293 467 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms