Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 RNU6-450P-201ENST00000364654 107 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 Y_RNA.270-201ENST00000364693 104 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 RNU6-740P-201ENST00000364734 105 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 RNU6-730P-201ENST00000383954 104 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 RNU6-317P-201ENST00000384031 107 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 SNORA75B-201ENST00000384053 137 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 RNU6-890P-201ENST00000384121 107 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 MIR1252-201ENST00000408861 65 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 VDAC1P9-201ENST00000412766 841 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 AC244452.1-201ENST00000413798 141 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 COX6CP15-201ENST00000426313 211 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 MED28P3-201ENST00000444288 531 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 CREM-226ENST00000469949 721 ntTSL 3 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 RN7SL379P-201ENST00000479912 293 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 RPL19P11-201ENST00000495944 589 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 AC004062.1-201ENST00000509926 645 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 AC027801.3-201ENST00000515049 698 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 RN7SKP238-201ENST00000516483 249 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 RN7SKP147-201ENST00000517154 244 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 MYL12AP1-201ENST00000518490 515 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 AL513327.3-201ENST00000602618 469 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 AL512329.1-201ENST00000404600 1592 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 AC010401.2-201ENST00000575137 4934 ntBASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CNTNAP3Q9BZ76 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CNTNAP3Q9BZ76 AC105074.1-201ENST00000623380 3095 ntBASIC6.34□□□□□ -1.4
CNTNAP3Q9BZ76 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CNTNAP3Q9BZ76 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 HSPA8P11-201ENST00000508840 1898 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 RNU4-66P-201ENST00000365199 138 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 Y_RNA.477-201ENST00000384352 108 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 MIR130B-202ENST00000385018 82 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 PCNPP3-201ENST00000393579 471 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 AL121972.1-201ENST00000402023 252 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 RNU6-101P-201ENST00000410323 104 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 AL357752.1-201ENST00000412817 349 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 PRUNEP1-201ENST00000425846 705 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 RPL7L1P10-201ENST00000427790 463 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 GAPDHP14-201ENST00000450472 937 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 PRPF38AP1-201ENST00000451976 933 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 MTND4LP30-201ENST00000454092 297 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 RPS4XP18-201ENST00000495480 763 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 RPS27P27-201ENST00000498779 255 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms