Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 RNU1-130P-201ENST00000363930 160 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 Y_RNA.582-201ENST00000391023 95 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 ENSAP1-201ENST00000392855 326 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 OR8V1P-201ENST00000395193 873 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 HMGB3P23-201ENST00000414981 585 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AL513325.1-201ENST00000417716 1034 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 BX510359.3-201ENST00000422168 306 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 GLRXP1-201ENST00000423261 334 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AL445928.1-201ENST00000435545 222 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 GAPDHP48-201ENST00000436626 961 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 RPL7P11-201ENST00000437586 658 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AC064862.4-201ENST00000442180 334 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AC023141.8-201ENST00000442554 208 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 NANOGNBP1-201ENST00000448444 480 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AC087312.1-201ENST00000471411 480 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AC087385.1-201ENST00000475062 312 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AC079600.1-201ENST00000550326 297 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AC051619.2-201ENST00000559063 397 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AL390208.1-201ENST00000605885 644 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AC010632.3-201ENST00000611377 369 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 RNA5SP440-201ENST00000612665 119 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AP001506.1-201ENST00000615444 211 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 U6atac.1-201ENST00000616025 117 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AC004009.2-201ENST00000623016 728 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AP002001.2-201ENST00000529025 1469 ntBASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM55Q9BYV6 AC092376.2-201ENST00000622621 4116 ntBASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 U3.7-201ENST00000363668 216 ntBASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 RNU6-744P-201ENST00000365557 107 ntBASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 RNU6-1316P-201ENST00000384242 108 ntBASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 Y_RNA.608-201ENST00000410647 95 ntBASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 Z93019.1-201ENST00000416450 973 ntBASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 BX890604.2-201ENST00000427883 474 ntBASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 SUMO2P3-201ENST00000438311 288 ntBASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 DNAJC19P4-201ENST00000440115 345 ntBASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 PGBD4P3-201ENST00000440731 581 ntBASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 AL445665.1-202ENST00000452436 324 ntBASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 TMED11P-201ENST00000479478 690 ntBASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 ATP5LP5-201ENST00000483050 299 ntBASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 AC112204.1-201ENST00000502591 103 ntBASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 NDUFB4P2-201ENST00000509515 391 ntBASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 RN7SKP82-201ENST00000516786 223 ntBASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 MTND4LP26-201ENST00000518144 282 ntBASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM55Q9BYV6 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms