Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 SPRR2C-201ENST00000290702 219 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 RNA5SP42-201ENST00000364278 115 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 RNA5SP105-201ENST00000391123 113 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 ATP5F1P3-201ENST00000397213 657 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 RN7SKP159-201ENST00000410657 292 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 RAB9AP4-201ENST00000415230 609 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 OR8F1P-201ENST00000425243 930 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 HIGD1AP12-201ENST00000427832 281 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 RPL21P89-201ENST00000444021 467 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 RAD1P2-201ENST00000446414 663 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 AC010307.1-201ENST00000467206 836 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 MTND6P6-201ENST00000478031 263 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 METTL15P1-201ENST00000481421 1045 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 AC110792.1-201ENST00000491826 472 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 RN7SKP209-201ENST00000516888 304 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 AP006245.1-201ENST00000522549 120 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 OR5AP1P-201ENST00000529730 940 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 RN7SL703P-201ENST00000578485 302 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 MIR4738-201ENST00000579134 87 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 AC008739.3-201ENST00000603262 127 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 AC006946.3-201ENST00000609791 756 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 AL713922.2-201ENST00000619384 716 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 AF001550.2-201ENST00000636643 217 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 OR6C71P-202ENST00000641886 1107 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 AC007656.2-201ENST00000624902 4547 ntBASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RSPO3Q9BXY4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 AL589826.1-201ENST00000340697 249 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 RNU4-7P-201ENST00000364758 141 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 MIR554-201ENST00000384874 96 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 RPL30P2-201ENST00000414021 291 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 AC114814.2-201ENST00000419195 485 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 FAM204CP-201ENST00000424489 642 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 SDCBPP2-201ENST00000424643 885 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 AC073069.1-201ENST00000428657 441 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 AC007389.2-201ENST00000434630 306 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 RPS29P31-201ENST00000446147 164 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 AL513343.1-201ENST00000451818 792 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 CYCSP53-201ENST00000455540 265 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 TPRKBP1-201ENST00000456243 481 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 AC089999.1-201ENST00000460336 374 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 AP002371.1-201ENST00000463604 433 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 FTH1P9-201ENST00000513251 355 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 AC109635.6-201ENST00000525487 1113 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 CYP2C60P-201ENST00000566088 139 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 AC244505.7-201ENST00000599675 272 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 ABI1P1-201ENST00000603375 1120 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 AC007620.3-201ENST00000608131 497 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 AC073592.7-201ENST00000623659 507 ntBASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.43□□□□□ -1.86
RSPO3Q9BXY4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RSPO3Q9BXY4 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms