Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AL159169.3-201ENST00000608871 561 ntBASIC4.55□□□□□ -1.68
RPAP1Q9BWH6 AC016957.2-201ENST00000616998 848 ntBASIC4.55□□□□□ -1.68
RPAP1Q9BWH6 RMST_5.1-201ENST00000618704 126 ntBASIC4.55□□□□□ -1.68
RPAP1Q9BWH6 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.55□□□□□ -1.68
RPAP1Q9BWH6 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.55□□□□□ -1.68
RPAP1Q9BWH6 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.55□□□□□ -1.68
RPAP1Q9BWH6 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RPAP1Q9BWH6 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RPAP1Q9BWH6 OR11H5P-202ENST00000641612 1325 ntBASIC4.55□□□□□ -1.68
RPAP1Q9BWH6 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RPAP1Q9BWH6 MAPK10-373ENST00000641983 6772 ntBASIC4.55□□□□□ -1.68
RPAP1Q9BWH6 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RPAP1Q9BWH6 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 RNA5SP72-201ENST00000364442 117 ntBASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 AL136131.1-201ENST00000406079 803 ntBASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 RNU2-65P-201ENST00000410162 185 ntBASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 RPS29P4-201ENST00000414733 161 ntBASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 MTCYBP7-201ENST00000419540 1134 ntBASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 PRDX3P3-201ENST00000447765 522 ntBASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 AC006480.1-201ENST00000449887 378 ntBASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 AC098824.1-201ENST00000453565 980 ntBASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 AC005726.1-201ENST00000494679 427 ntBASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 PRELID3BP7-201ENST00000503606 469 ntBASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 SNORA70.24-201ENST00000517233 118 ntBASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 SNORA62.6-201ENST00000606322 83 ntBASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 AC092354.2-201ENST00000607786 514 ntBASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 AL354760.1-201ENST00000608357 643 ntBASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 AL356274.1-201ENST00000617064 410 ntBASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 AC091905.1-201ENST00000624400 311 ntBASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPAP1Q9BWH6 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 RNU4-23P-201ENST00000362839 140 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 RNU6-670P-201ENST00000364312 104 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 SNORD3H-201ENST00000384486 214 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 RPL7P60-201ENST00000397636 735 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 AC245052.5-201ENST00000416320 649 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 AL035423.1-201ENST00000420331 213 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 AC093698.1-201ENST00000423843 571 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 AP000936.3-201ENST00000438127 255 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 SNORA71B-202ENST00000439232 272 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 SETD6P1-201ENST00000444575 317 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 NPM1P39-201ENST00000449818 867 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 TRBV12-2-201ENST00000489763 344 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 CAB39P1-201ENST00000502277 460 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 AC004069.2-201ENST00000505438 1114 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 MIR4644-201ENST00000579929 84 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 AC005412.1-201ENST00000580812 1049 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 AC244505.7-201ENST00000599675 272 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 OR5AC4P-202ENST00000642086 985 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 AC087565.3-202ENST00000642085 1603 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 AC134882.1-201ENST00000603738 1676 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 AC093535.2-201ENST00000624769 2326 ntBASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RPAP1Q9BWH6 RNA5SP51-201ENST00000364750 119 ntBASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 RPS6P12-201ENST00000432491 726 ntBASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 AL159987.2-201ENST00000432754 307 ntBASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 HSPD1P21-201ENST00000436541 245 ntBASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 RPS3AP46-201ENST00000448352 682 ntBASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 CDH12P2-201ENST00000504393 298 ntBASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 WBP1LP4-201ENST00000505043 344 ntBASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 AC117525.1-201ENST00000515228 503 ntBASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.53□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms