Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 MTCO1P30-201ENST00000515244 580 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX3Q99909 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.86□□□□□ -1.79
SSX3Q99909 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.86□□□□□ -1.79
SSX3Q99909 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.86□□□□□ -1.79
SSX3Q99909 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX3Q99909 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.86□□□□□ -1.79
SSX3Q99909 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX3Q99909 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SSX3Q99909 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.86□□□□□ -1.79
SSX3Q99909 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.86□□□□□ -1.79
SSX3Q99909 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.86□□□□□ -1.79
SSX3Q99909 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.86□□□□□ -1.79
SSX3Q99909 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX3Q99909 AC008759.1-201ENST00000589783 983 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.86□□□□□ -1.79
SSX3Q99909 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SSX3Q99909 RPL7P50-201ENST00000600588 727 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 AC002487.1-201ENST00000604565 994 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 AL009028.1-201ENST00000604895 802 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 AC097504.2-201ENST00000608088 454 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 MIR6780A-201ENST00000615089 68 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 AL359715.5-201ENST00000623431 443 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SSX3Q99909 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX3Q99909 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSX3Q99909 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSX3Q99909 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX3Q99909 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
SSX3Q99909 AC027287.1-201ENST00000553115 1453 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SSX3Q99909 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSX3Q99909 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSX3Q99909 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSX3Q99909 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.85□□□□□ -1.79
SSX3Q99909 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSX3Q99909 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSX3Q99909 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSX3Q99909 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSX3Q99909 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSX3Q99909 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSX3Q99909 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSX3Q99909 AL590240.1-201ENST00000334118 313 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSX3Q99909 RNU6-398P-201ENST00000384143 109 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SSX3Q99909 Y_RNA.625-201ENST00000411256 107 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 RSU1P3-201ENST00000412878 835 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 AC119751.6-201ENST00000416712 186 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 LINC00993-201ENST00000420453 540 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 AC068287.1-201ENST00000430283 295 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 MTCYBP15-201ENST00000433123 1127 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSX3Q99909 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSX3Q99909 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.85□□□□□ -1.79
SSX3Q99909 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.85□□□□□ -1.79
SSX3Q99909 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.85□□□□□ -1.79
SSX3Q99909 HMGB1P16-201ENST00000447155 540 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 AC104651.2-201ENST00000447549 528 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.85□□□□□ -1.79
SSX3Q99909 TPT1P13-201ENST00000449760 499 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSX3Q99909 NDUFA12P1-201ENST00000455914 406 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 FCF1P6-201ENST00000456841 595 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.85□□□□□ -1.79
SSX3Q99909 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.85□□□□□ -1.79
SSX3Q99909 HNRNPKP5-201ENST00000515300 253 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 HIGD1AP6-201ENST00000521833 279 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 OR5BC1P-201ENST00000529327 739 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.85□□□□□ -1.79
SSX3Q99909 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.85□□□□□ -1.79
SSX3Q99909 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.85□□□□□ -1.79
SSX3Q99909 AC004217.3-201ENST00000551552 878 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.85□□□□□ -1.79
SSX3Q99909 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSX3Q99909 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.85□□□□□ -1.79
SSX3Q99909 ZNF971P-201ENST00000562068 1249 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.85□□□□□ -1.79
SSX3Q99909 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.85□□□□□ -1.79
SSX3Q99909 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.85□□□□□ -1.79
SSX3Q99909 RN7SL802P-201ENST00000577858 299 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 MIR5699-201ENST00000578903 90 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 MIR4644-201ENST00000579929 84 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSX3Q99909 AC007566.2-201ENST00000603642 413 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 AL139022.2-201ENST00000606934 443 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 AC023043.4-201ENST00000612081 449 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 AC004808.1-201ENST00000627671 721 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 AC013437.2-201ENST00000639587 677 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.85□□□□□ -1.79
SSX3Q99909 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSX3Q99909 AL442639.1-201ENST00000625030 1899 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 ELL2P4-201ENST00000446870 1376 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.85□□□□□ -1.79
SSX3Q99909 SGO1P1-201ENST00000603525 1447 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 AC009643.2-201ENST00000603543 1448 ntBASIC3.85□□□□□ -1.79
SSX3Q99909 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.85□□□□□ -1.79
SSX3Q99909 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSX3Q99909 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms