Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 EIF4EP5-201ENST00000528228 640 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AL121821.2-201ENST00000556081 394 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AL390334.1-201ENST00000556395 450 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 MIR5095-201ENST00000578844 88 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 MTATP6P2-201ENST00000603319 678 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 BNIP3P9-201ENST00000603714 553 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AL121873.1-201ENST00000616013 524 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC084757.4-201ENST00000616350 526 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC025162.2-201ENST00000619602 560 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC021106.3-201ENST00000623925 531 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC026422.1-201ENST00000623961 452 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 MYH10-203ENST00000379980 7694 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 MYO5A-202ENST00000358212 12220 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 MYO5A-206ENST00000399233 12220 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RAD1P1-201ENST00000231383 813 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC073343.1-201ENST00000328239 651 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RPL7P26-201ENST00000333817 754 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RNU6-1318P-201ENST00000365389 103 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 MIR1204-201ENST00000408388 67 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RPL22P18-201ENST00000417197 377 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 MTCO2P23-201ENST00000425216 680 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 KRTAP3-4P-201ENST00000430780 280 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AL132765.1-201ENST00000434165 553 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 KRT8P51-201ENST00000438938 274 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 EPS15P1-201ENST00000448836 336 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC125388.1-201ENST00000459631 156 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 GMFBP1-201ENST00000467831 427 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RPL17P19-201ENST00000489069 552 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC139783.2-201ENST00000504847 1145 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RNA5SP400-201ENST00000517155 111 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC140658.3-201ENST00000567603 271 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC025574.2-201ENST00000615621 514 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AL353795.3-201ENST00000624351 5702 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 TOGARAM1-201ENST00000361462 6375 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC007614.5-201ENST00000623424 8892 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
HMCN1Q96RW7 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC1.65□□□□□ -2.14
HMCN1Q96RW7 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
HMCN1Q96RW7 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
HMCN1Q96RW7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
HMCN1Q96RW7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
HMCN1Q96RW7 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.65□□□□□ -2.14
HMCN1Q96RW7 OR1L1-202ENST00000373686 1083 ntBASIC1.65□□□□□ -2.14
HMCN1Q96RW7 PCNPP3-201ENST00000393579 471 ntBASIC1.65□□□□□ -2.14
HMCN1Q96RW7 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC1.65□□□□□ -2.14
HMCN1Q96RW7 RPL6P21-201ENST00000418672 846 ntBASIC1.65□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms