Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.84□□□□□ -1.79
ECHDC3Q96DC8 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.84□□□□□ -1.79
ECHDC3Q96DC8 MIMT1-201ENST00000597105 1050 ntBASIC3.84□□□□□ -1.79
ECHDC3Q96DC8 AL390816.3-201ENST00000604527 1066 ntBASIC3.84□□□□□ -1.79
ECHDC3Q96DC8 AP003392.5-201ENST00000607857 415 ntBASIC3.84□□□□□ -1.79
ECHDC3Q96DC8 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.84□□□□□ -1.79
ECHDC3Q96DC8 AC005344.1-201ENST00000613391 459 ntBASIC3.84□□□□□ -1.79
ECHDC3Q96DC8 MIR4727-201ENST00000622232 55 ntBASIC3.84□□□□□ -1.79
ECHDC3Q96DC8 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ECHDC3Q96DC8 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
ECHDC3Q96DC8 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
ECHDC3Q96DC8 AP004289.2-201ENST00000444413 1457 ntBASIC3.84□□□□□ -1.8
ECHDC3Q96DC8 AC006042.3-201ENST00000454684 1469 ntBASIC3.84□□□□□ -1.8
ECHDC3Q96DC8 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
ECHDC3Q96DC8 MTCO1P14-201ENST00000441695 1559 ntBASIC3.84□□□□□ -1.8
ECHDC3Q96DC8 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
ECHDC3Q96DC8 AL161912.2-201ENST00000565707 3007 ntBASIC3.84□□□□□ -1.8
ECHDC3Q96DC8 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 MIR124-3-201ENST00000384866 87 ntBASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 MIR1183-201ENST00000408856 89 ntBASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 AMD1P2-201ENST00000412936 992 ntBASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 OR4F13P-201ENST00000428478 931 ntBASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 AC087650.1-201ENST00000431445 468 ntBASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 MTCYBP21-201ENST00000443300 1113 ntBASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 NOTCH2P1-201ENST00000443481 624 ntBASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 AL133162.1-201ENST00000463228 453 ntBASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 AC007688.1-201ENST00000475592 759 ntBASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 OR52A4P-203ENST00000498233 1014 ntBASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 RAC1P2-201ENST00000511164 579 ntBASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 AC023158.1-201ENST00000561632 1025 ntBASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 NF1P5-201ENST00000588287 448 ntBASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 AL133247.2-201ENST00000603236 482 ntBASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 AL137849.1-201ENST00000604767 169 ntBASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 SNORA62.6-201ENST00000606322 83 ntBASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 AL355816.1-201ENST00000607951 118 ntBASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 AC079684.1-201ENST00000621405 437 ntBASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 AP003072.4-201ENST00000624580 310 ntBASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ECHDC3Q96DC8 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 AL139811.1-201ENST00000424779 2299 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 U8.11-201ENST00000384699 133 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 U8.12-201ENST00000384701 133 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 RN7SKP202-201ENST00000410439 330 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 SNORA57.3-201ENST00000411095 141 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 TCEA1P2-201ENST00000420496 906 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 OR5AW1P-201ENST00000426334 1006 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 YWHAEP5-201ENST00000431545 765 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 MRPS33P4-201ENST00000434892 317 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 SNORA71B-202ENST00000439232 272 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 UBDP1-202ENST00000457888 382 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 U8.18-201ENST00000459285 133 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 AC068305.1-201ENST00000497406 726 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 MTND4LP31-201ENST00000514859 294 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 MIR5187-201ENST00000583479 76 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 RNU1-30P-201ENST00000606575 163 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 AC084036.1-201ENST00000609190 508 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 AL713922.2-201ENST00000619384 716 ntBASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ECHDC3Q96DC8 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms