Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 HMGB1P5-202ENST00000451497 985 ntBASIC5.65□□□□□ -1.5
TOPBP1Q92547 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.65□□□□□ -1.5
TOPBP1Q92547 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.65□□□□□ -1.5
TOPBP1Q92547 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.65□□□□□ -1.5
TOPBP1Q92547 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.65□□□□□ -1.5
TOPBP1Q92547 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TOPBP1Q92547 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
TOPBP1Q92547 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC5.65□□□□□ -1.51
TOPBP1Q92547 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TOPBP1Q92547 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TOPBP1Q92547 RNU1-70P-201ENST00000362618 164 ntBASIC5.64□□□□□ -1.51
TOPBP1Q92547 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.64□□□□□ -1.51
TOPBP1Q92547 ATP5HP2-201ENST00000433885 485 ntBASIC5.64□□□□□ -1.51
TOPBP1Q92547 RPS4XP2-201ENST00000458402 793 ntBASIC5.64□□□□□ -1.51
TOPBP1Q92547 AC010486.1-201ENST00000511793 424 ntBASIC5.64□□□□□ -1.51
TOPBP1Q92547 AC022080.3-201ENST00000544433 482 ntBASIC5.64□□□□□ -1.51
TOPBP1Q92547 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.64□□□□□ -1.51
TOPBP1Q92547 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC5.64□□□□□ -1.51
TOPBP1Q92547 AL669942.2-201ENST00000620352 697 ntBASIC5.64□□□□□ -1.51
TOPBP1Q92547 AL590240.3-201ENST00000621416 943 ntBASIC5.64□□□□□ -1.51
TOPBP1Q92547 AC007998.5-201ENST00000622938 237 ntBASIC5.64□□□□□ -1.51
TOPBP1Q92547 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.64□□□□□ -1.51
TOPBP1Q92547 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TOPBP1Q92547 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.64□□□□□ -1.51
TOPBP1Q92547 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TOPBP1Q92547 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TOPBP1Q92547 RNA5SP229-201ENST00000410809 99 ntBASIC5.64□□□□□ -1.51
TOPBP1Q92547 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.64□□□□□ -1.51
TOPBP1Q92547 BX890604.2-201ENST00000427883 474 ntBASIC5.64□□□□□ -1.51
TOPBP1Q92547 AC233982.1-201ENST00000451247 436 ntBASIC5.64□□□□□ -1.51
TOPBP1Q92547 ANP32BP2-201ENST00000454525 545 ntBASIC5.64□□□□□ -1.51
TOPBP1Q92547 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.64□□□□□ -1.51
TOPBP1Q92547 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.64□□□□□ -1.51
TOPBP1Q92547 AC091826.1-201ENST00000514065 313 ntBASIC5.64□□□□□ -1.51
TOPBP1Q92547 RPL12P22-201ENST00000519073 490 ntBASIC5.64□□□□□ -1.51
TOPBP1Q92547 PSMA2P1-201ENST00000526365 646 ntBASIC5.64□□□□□ -1.51
TOPBP1Q92547 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.64□□□□□ -1.51
TOPBP1Q92547 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TOPBP1Q92547 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC5.64□□□□□ -1.51
TOPBP1Q92547 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
TOPBP1Q92547 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.63□□□□□ -1.51
TOPBP1Q92547 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TOPBP1Q92547 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TOPBP1Q92547 FTLP6-201ENST00000355274 422 ntBASIC5.63□□□□□ -1.51
TOPBP1Q92547 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.63□□□□□ -1.51
TOPBP1Q92547 MTND4P22-201ENST00000413116 1169 ntBASIC5.63□□□□□ -1.51
TOPBP1Q92547 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.63□□□□□ -1.51
TOPBP1Q92547 AL356535.1-201ENST00000440335 398 ntBASIC5.63□□□□□ -1.51
TOPBP1Q92547 APOOP4-201ENST00000513530 597 ntBASIC5.63□□□□□ -1.51
TOPBP1Q92547 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.63□□□□□ -1.51
TOPBP1Q92547 HIGD1AP1-201ENST00000550979 275 ntBASIC5.63□□□□□ -1.51
TOPBP1Q92547 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TOPBP1Q92547 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TOPBP1Q92547 AC097634.1-201ENST00000604491 2467 ntBASIC5.62□□□□□ -1.51
TOPBP1Q92547 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TOPBP1Q92547 RNA5SP52-201ENST00000362448 134 ntBASIC5.62□□□□□ -1.51
TOPBP1Q92547 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TOPBP1Q92547 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
TOPBP1Q92547 Z99755.1-201ENST00000414048 380 ntBASIC5.62□□□□□ -1.51
TOPBP1Q92547 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TOPBP1Q92547 RPL21P109-201ENST00000422213 475 ntBASIC5.62□□□□□ -1.51
TOPBP1Q92547 RPL35AP12-201ENST00000425362 338 ntBASIC5.62□□□□□ -1.51
TOPBP1Q92547 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TOPBP1Q92547 OR2A20P-203ENST00000498397 1268 ntBASIC5.62□□□□□ -1.51
TOPBP1Q92547 AC010374.2-201ENST00000512933 535 ntBASIC5.62□□□□□ -1.51
TOPBP1Q92547 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.62□□□□□ -1.51
TOPBP1Q92547 KCTD9P6-201ENST00000522306 950 ntBASIC5.62□□□□□ -1.51
TOPBP1Q92547 SULT1C2P2-201ENST00000562517 294 ntBASIC5.62□□□□□ -1.51
TOPBP1Q92547 AL390838.2-201ENST00000602394 274 ntBASIC5.62□□□□□ -1.51
TOPBP1Q92547 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TOPBP1Q92547 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TOPBP1Q92547 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TOPBP1Q92547 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC5.62□□□□□ -1.51
TOPBP1Q92547 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
TOPBP1Q92547 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TOPBP1Q92547 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TOPBP1Q92547 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TOPBP1Q92547 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
TOPBP1Q92547 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
TOPBP1Q92547 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TOPBP1Q92547 SNORA7.4-201ENST00000384249 137 ntBASIC5.61□□□□□ -1.51
TOPBP1Q92547 EIF4EP1-201ENST00000422311 642 ntBASIC5.61□□□□□ -1.51
TOPBP1Q92547 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.61□□□□□ -1.51
TOPBP1Q92547 AP000926.4-201ENST00000527351 454 ntBASIC5.61□□□□□ -1.51
TOPBP1Q92547 AC020914.4-201ENST00000597690 277 ntBASIC5.61□□□□□ -1.51
TOPBP1Q92547 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.61□□□□□ -1.51
TOPBP1Q92547 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
TOPBP1Q92547 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TOPBP1Q92547 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TOPBP1Q92547 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TOPBP1Q92547 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TOPBP1Q92547 ARF4P3-201ENST00000397387 509 ntBASIC5.6□□□□□ -1.51
TOPBP1Q92547 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.6□□□□□ -1.51
TOPBP1Q92547 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.6□□□□□ -1.51
TOPBP1Q92547 RPS29P26-201ENST00000477483 171 ntBASIC5.6□□□□□ -1.51
TOPBP1Q92547 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.6□□□□□ -1.51
TOPBP1Q92547 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.6□□□□□ -1.51
TOPBP1Q92547 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.6□□□□□ -1.51
TOPBP1Q92547 AC006946.3-201ENST00000609791 756 ntBASIC5.6□□□□□ -1.51
TOPBP1Q92547 AC100793.4-201ENST00000613683 429 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms