Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 RPS7P15-201ENST00000415804 584 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AL049830.2-201ENST00000480072 201 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 SNORA70.18-201ENST00000516696 98 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AL645937.1-201ENST00000641739 1652 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 ANKRD36P1-201ENST00000344424 659 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 Y_RNA.238-201ENST00000364441 102 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 ATP5JP1-201ENST00000431631 322 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 DCLRE1CP1-201ENST00000454630 470 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 RMST_9.1-201ENST00000619945 193 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 GSTA8P-201ENST00000404253 637 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 ATP5A1P2-202ENST00000616464 443 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 MIR8057-201ENST00000620957 69 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 USP9YP36-201ENST00000424581 829 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 USP9YP31-201ENST00000431405 881 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 RPL21P10-201ENST00000463521 490 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 FAM172BP-201ENST00000487497 1089 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AC008011.1-201ENST00000545989 227 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 HMGB3P26-201ENST00000560051 582 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 PHKBP1-201ENST00000450951 1951 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 Z82195.2-201ENST00000612348 18351 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AL079342.1-201ENST00000401460 267 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 Z98941.1-201ENST00000407764 100 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AL590609.2-201ENST00000421430 368 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 RPL23AP25-201ENST00000430973 463 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 RN7SL807P-201ENST00000470923 297 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AC026333.2-201ENST00000542164 106 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AP003355.3-201ENST00000623465 114 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 RNU6-249P-201ENST00000363016 102 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 BX323014.1-201ENST00000412876 237 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AL391219.1-201ENST00000422570 483 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 KCTD9P3-201ENST00000434597 1169 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 DNAJC19P8-201ENST00000452887 259 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 VN1R40P-201ENST00000455196 941 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 BTF3P5-201ENST00000457252 467 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 CKS1BP3-201ENST00000600888 237 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AC119674.1-207ENST00000641355 633 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 RNA5SP399-201ENST00000364003 117 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 RPL7AP73-201ENST00000413490 353 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 OSTCP5-201ENST00000425293 453 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 SNORD105B-201ENST00000458770 79 ntBASIC1.11□□□□□ -2.23
SYNE1Q8NF91 CREM-226ENST00000469949 721 ntTSL 3 BASIC1.11□□□□□ -2.23
SYNE1Q8NF91 AC233309.1-201ENST00000619522 751 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms