Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC115085.1-201ENST00000588924 229 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 TUG1_1.1-201ENST00000610654 145 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 Y_RNA.804-201ENST00000615262 101 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AC104964.3-201ENST00000606115 2860 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 OR4A15-201ENST00000314706 1035 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 RNU6-1090P-201ENST00000364065 94 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 MTCO3P40-201ENST00000392516 676 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 RN7SKP263-201ENST00000411194 309 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AC138393.2-201ENST00000414742 246 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AC069157.1-201ENST00000421749 137 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 HSPD1P12-201ENST00000429127 1069 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AC073464.1-201ENST00000429823 534 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 USP12PX-201ENST00000432383 1057 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AC010881.1-201ENST00000433830 235 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 RPL7P11-201ENST00000437586 658 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AC098614.3-201ENST00000438957 440 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AL450263.2-201ENST00000439400 589 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 RPS3AP14-201ENST00000483907 780 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AC012170.1-201ENST00000495139 359 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AC108078.1-201ENST00000508073 725 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 MTND6P2-201ENST00000512226 524 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AC006499.2-201ENST00000513470 337 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 MTCO2P4-201ENST00000517968 247 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AL049779.2-201ENST00000553847 315 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AP005403.1-201ENST00000579720 229 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 MIR4307-201ENST00000582802 84 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AC022916.3-201ENST00000592961 742 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 IMMP1LP3-201ENST00000604197 224 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AC112187.2-201ENST00000604345 283 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AC009027.1-201ENST00000604510 479 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AC000068.2-201ENST00000608816 460 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AC110994.2-201ENST00000635481 492 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 AC099654.10-201ENST00000640395 161 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 OR4G11P-202ENST00000642116 1414 ntBASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM48Q8IWZ4 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 AC021242.1-201ENST00000507315 2035 ntBASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 GSTA9P-201ENST00000406231 611 ntBASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 MIR1286-201ENST00000408112 78 ntBASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 AC233981.1-201ENST00000423224 461 ntBASIC5.35□□□□□ -1.55
TRIM48Q8IWZ4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms