Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 RNA5SP509-201ENST00000364577 119 ntBASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 SNORD51.1-201ENST00000365405 77 ntBASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 Z98941.1-201ENST00000407764 100 ntBASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 RN7SKP33-201ENST00000410942 340 ntBASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 RPL30P2-201ENST00000414021 291 ntBASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 RPL26P29-201ENST00000415623 438 ntBASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AC127526.1-201ENST00000417526 366 ntBASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AL159169.1-201ENST00000421119 127 ntBASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 RPS27AP7-201ENST00000422792 455 ntBASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AC245028.1-201ENST00000423259 256 ntBASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 DNAJC19P7-201ENST00000428811 344 ntBASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 MTATP6P22-201ENST00000507369 598 ntBASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AC008802.1-201ENST00000519121 791 ntBASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 CKS1BP1-201ENST00000555221 240 ntBASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AC114781.5-201ENST00000615297 108 ntBASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 AC010435.1-201ENST00000623353 1177 ntBASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.79□□□□□ -1.8
NUDCD3Q8IVD9 TNPO1P3-201ENST00000436471 2662 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 RNA5SP443-201ENST00000363083 132 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 HIGD1AP12-201ENST00000427832 281 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 FO393419.3-201ENST00000428741 282 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 AC068287.1-201ENST00000430283 295 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 RPS15AP29-201ENST00000445539 400 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 AL162151.2-201ENST00000448875 158 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 RPS29P33-201ENST00000456717 146 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 UQCRHP4-201ENST00000471686 272 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 AC025181.1-201ENST00000477507 416 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 AC091167.1-201ENST00000492017 396 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 AC108941.1-201ENST00000502853 530 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 AC010285.3-201ENST00000511668 676 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 SNORA31.13-201ENST00000516624 135 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 YPEL5P3-201ENST00000547227 352 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 MTND4LP24-201ENST00000572277 291 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 IPO5P1-202ENST00000600039 287 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 AL356218.2-201ENST00000605264 187 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 AP003117.2-201ENST00000606010 545 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 AL356490.1-201ENST00000623079 479 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 AC004943.3-201ENST00000624116 600 ntBASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.78□□□□□ -1.8
NUDCD3Q8IVD9 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms