Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AL136116.1-201ENST00000403591 381 ntBASIC3.31□□□□□ -1.88
LRRC28Q86X40 TCEA1P4-201ENST00000415066 844 ntBASIC3.31□□□□□ -1.88
LRRC28Q86X40 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRC28Q86X40 MTCYBP21-201ENST00000443300 1113 ntBASIC3.31□□□□□ -1.88
LRRC28Q86X40 TVP23BP2-201ENST00000455082 615 ntBASIC3.31□□□□□ -1.88
LRRC28Q86X40 RPL21P11-201ENST00000461458 483 ntBASIC3.31□□□□□ -1.88
LRRC28Q86X40 RN7SL330P-201ENST00000469709 307 ntBASIC3.31□□□□□ -1.88
LRRC28Q86X40 CYCSP20-201ENST00000473154 315 ntBASIC3.31□□□□□ -1.88
LRRC28Q86X40 AP000893.1-201ENST00000474462 794 ntBASIC3.31□□□□□ -1.88
LRRC28Q86X40 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRC28Q86X40 MTND4LP31-201ENST00000514859 294 ntBASIC3.31□□□□□ -1.88
LRRC28Q86X40 YPEL5P3-201ENST00000547227 352 ntBASIC3.31□□□□□ -1.88
LRRC28Q86X40 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRC28Q86X40 TGIF1P1-201ENST00000558095 802 ntBASIC3.31□□□□□ -1.88
LRRC28Q86X40 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC28Q86X40 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRC28Q86X40 MIR8058-201ENST00000615737 89 ntBASIC3.31□□□□□ -1.88
LRRC28Q86X40 AC099669.2-201ENST00000616549 437 ntBASIC3.31□□□□□ -1.88
LRRC28Q86X40 AC016957.2-201ENST00000616998 848 ntBASIC3.31□□□□□ -1.88
LRRC28Q86X40 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC28Q86X40 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC28Q86X40 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC28Q86X40 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC28Q86X40 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC28Q86X40 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
LRRC28Q86X40 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LRRC28Q86X40 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC28Q86X40 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
LRRC28Q86X40 CUL4AP1-201ENST00000514750 1863 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRC28Q86X40 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRRC28Q86X40 AC058791.1-201ENST00000608412 3198 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 SEPT7P7-201ENST00000420492 1301 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 AF127577.6-201ENST00000623352 2191 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 RNA5SP97-201ENST00000365006 84 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC28Q86X40 AC025750.1-201ENST00000399891 379 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 SNORA81-201ENST00000408493 178 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 RPL36AP36-201ENST00000418616 301 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LRRC28Q86X40 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.3□□□□□ -1.88
LRRC28Q86X40 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.3□□□□□ -1.88
LRRC28Q86X40 TXNP1-201ENST00000441872 371 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 AL359073.1-201ENST00000448036 403 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 MRPS31P2-201ENST00000451581 518 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 OR9M1P-201ENST00000459641 921 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 AC010468.1-201ENST00000461022 817 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
LRRC28Q86X40 AC092451.1-201ENST00000480211 153 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LRRC28Q86X40 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC28Q86X40 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LRRC28Q86X40 NDUFA5P2-201ENST00000519723 344 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.3□□□□□ -1.88
LRRC28Q86X40 HIGD1AP10-201ENST00000527837 282 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC28Q86X40 AL389895.1-201ENST00000554127 252 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.3□□□□□ -1.88
LRRC28Q86X40 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.3□□□□□ -1.88
LRRC28Q86X40 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC28Q86X40 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC28Q86X40 RN7SL703P-201ENST00000578485 302 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 AC115621.1-201ENST00000604653 858 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 AL109618.2-201ENST00000605527 211 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.3□□□□□ -1.88
LRRC28Q86X40 AL354798.1-201ENST00000622505 329 ntBASIC3.3□□□□□ -1.88
LRRC28Q86X40 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC28Q86X40 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRRC28Q86X40 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRC28Q86X40 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRRC28Q86X40 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.3□□□□□ -1.88
LRRC28Q86X40 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
LRRC28Q86X40 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRC28Q86X40 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
LRRC28Q86X40 FAM91A3P-201ENST00000456826 2544 ntBASIC3.29□□□□□ -1.88
LRRC28Q86X40 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC28Q86X40 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC28Q86X40 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC28Q86X40 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC28Q86X40 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
LRRC28Q86X40 EI24P2-201ENST00000397776 1076 ntBASIC3.29□□□□□ -1.88
LRRC28Q86X40 ZNF602P-201ENST00000405929 924 ntBASIC3.29□□□□□ -1.88
LRRC28Q86X40 SNORA3.3-201ENST00000408712 125 ntBASIC3.29□□□□□ -1.88
LRRC28Q86X40 RN7SKP202-201ENST00000410439 330 ntBASIC3.29□□□□□ -1.88
LRRC28Q86X40 RN7SKP159-201ENST00000410657 292 ntBASIC3.29□□□□□ -1.88
LRRC28Q86X40 RNU6-55P-201ENST00000411092 107 ntBASIC3.29□□□□□ -1.88
LRRC28Q86X40 RNU6-954P-201ENST00000411355 107 ntBASIC3.29□□□□□ -1.88
LRRC28Q86X40 AC007390.1-201ENST00000415722 356 ntBASIC3.29□□□□□ -1.88
LRRC28Q86X40 Z97055.1-201ENST00000419730 712 ntBASIC3.29□□□□□ -1.88
LRRC28Q86X40 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC28Q86X40 AL049610.1-201ENST00000423374 372 ntBASIC3.29□□□□□ -1.88
LRRC28Q86X40 OSTCP5-201ENST00000425293 453 ntBASIC3.29□□□□□ -1.88
LRRC28Q86X40 AL158071.1-201ENST00000430315 461 ntBASIC3.29□□□□□ -1.88
LRRC28Q86X40 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRC28Q86X40 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRC28Q86X40 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRC28Q86X40 RPS29P7-201ENST00000439662 171 ntBASIC3.29□□□□□ -1.88
LRRC28Q86X40 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRC28Q86X40 CDC27P1-201ENST00000445384 715 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms