Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RN7SKP219-201ENST00000516825 296 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AC023968.1-201ENST00000560719 475 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 RN7SL475P-201ENST00000583379 298 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AC063977.7-201ENST00000594454 337 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AL592436.1-201ENST00000605135 558 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AC018889.1-201ENST00000605372 397 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AC107871.2-201ENST00000612894 502 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AC015712.7-201ENST00000615211 635 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AL132640.3-201ENST00000630473 177 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 KPNA2P2-201ENST00000419546 1489 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 PNPT1P2-201ENST00000456768 2050 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 CDC27P3-201ENST00000635418 1910 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 IMMTP1-201ENST00000435590 2219 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AC011455.2-201ENST00000599320 3336 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 USP9YP4-201ENST00000424401 1745 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AC068769.1-201ENST00000474767 2426 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 RNA5SP485-201ENST00000365053 119 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 Y_RNA.367-201ENST00000365544 101 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AL139397.2-201ENST00000404529 772 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AL606923.1-201ENST00000406616 190 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 DPH3P2-201ENST00000422618 250 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AL034379.1-201ENST00000423216 253 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 RPS20P5-201ENST00000434808 360 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AF228730.2-201ENST00000438784 848 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AL138899.2-201ENST00000439139 499 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AC118758.1-202ENST00000454719 225 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AP000889.1-201ENST00000530968 660 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AC007375.1-201ENST00000554513 578 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 TPRX1P1-201ENST00000557620 319 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AC016727.2-201ENST00000603988 621 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AL670379.11-201ENST00000604059 253 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AL670379.10-201ENST00000604330 253 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AL670379.12-201ENST00000605291 253 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AC018462.2-201ENST00000605375 395 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AL670379.9-201ENST00000605428 253 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AL138960.1-201ENST00000613838 513 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AL591926.1-201ENST00000620542 217 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AL162377.2-201ENST00000624532 337 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 ATM-230ENST00000640388 578 ntTSL 5 BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LYSMD3Q7Z3D4 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
LYSMD3Q7Z3D4 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.42□□□□□ -1.38
LYSMD3Q7Z3D4 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.42□□□□□ -1.38
LYSMD3Q7Z3D4 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
LYSMD3Q7Z3D4 AC105749.1-201ENST00000631338 2008 ntBASIC6.42□□□□□ -1.38
LYSMD3Q7Z3D4 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LYSMD3Q7Z3D4 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
LYSMD3Q7Z3D4 AL731556.1-201ENST00000394628 3711 ntBASIC6.42□□□□□ -1.38
LYSMD3Q7Z3D4 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LYSMD3Q7Z3D4 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms