Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VPS13CQ709C8 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VPS13CQ709C8 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VPS13CQ709C8 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 Y_RNA.466-201ENST00000384294 113 ntBASIC2.72□□□□□ -1.97
VPS13CQ709C8 RNU4-47P-201ENST00000410876 114 ntBASIC2.72□□□□□ -1.97
VPS13CQ709C8 MTND4P22-201ENST00000413116 1169 ntBASIC2.72□□□□□ -1.97
VPS13CQ709C8 HMGB1P18-201ENST00000438801 619 ntBASIC2.72□□□□□ -1.97
VPS13CQ709C8 ELOCP8-201ENST00000439309 332 ntBASIC2.72□□□□□ -1.97
VPS13CQ709C8 ELOCP15-201ENST00000442090 332 ntBASIC2.72□□□□□ -1.97
VPS13CQ709C8 YWHAQP9-201ENST00000445891 512 ntBASIC2.72□□□□□ -1.97
VPS13CQ709C8 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 HMGB1P3-201ENST00000502802 616 ntBASIC2.72□□□□□ -1.97
VPS13CQ709C8 AC018552.3-201ENST00000567416 561 ntBASIC2.72□□□□□ -1.97
VPS13CQ709C8 AC005242.1-201ENST00000585658 438 ntBASIC2.72□□□□□ -1.97
VPS13CQ709C8 AL162574.2-201ENST00000614618 657 ntBASIC2.72□□□□□ -1.97
VPS13CQ709C8 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
VPS13CQ709C8 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VPS13CQ709C8 OR13C3-201ENST00000374781 1108 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 AL353692.2-201ENST00000407054 335 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 SEPT7P8-201ENST00000413308 775 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 AC140076.1-201ENST00000449897 361 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 AC117440.1-201ENST00000474107 571 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 OR2A20P-203ENST00000498397 1268 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 AC015849.2-201ENST00000605738 409 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 AC231759.1-201ENST00000616455 597 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VPS13CQ709C8 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 MAPK10-362ENST00000641864 4484 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
VPS13CQ709C8 AC096638.2-201ENST00000434965 711 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 AC084357.1-201ENST00000473404 255 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 AL591424.2-201ENST00000617023 128 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 AC138393.1-206ENST00000540997 1886 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VPS13CQ709C8 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 AC112198.2-201ENST00000426589 6996 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 SYF2-202ENST00000354361 926 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 SNORA18.3-201ENST00000384122 132 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 AL139413.1-201ENST00000421309 217 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 ETF1P3-201ENST00000430422 1160 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 S100A11P1-201ENST00000477525 312 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 FCF1P3-201ENST00000496394 590 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
VPS13CQ709C8 SCARNA20.6-201ENST00000517251 106 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 DPPA3P2-201ENST00000553589 478 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 AP004607.9-201ENST00000618202 316 ntBASIC2.71□□□□□ -1.98
VPS13CQ709C8 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.71□□□□□ -1.98
VPS13CQ709C8 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.7□□□□□ -1.98
VPS13CQ709C8 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS13CQ709C8 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
VPS13CQ709C8 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
VPS13CQ709C8 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS13CQ709C8 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
VPS13CQ709C8 AC021678.1-201ENST00000505195 936 ntBASIC2.7□□□□□ -1.98
VPS13CQ709C8 ATP5F1P5-201ENST00000526403 760 ntBASIC2.7□□□□□ -1.98
VPS13CQ709C8 MTND6P33-201ENST00000571794 183 ntBASIC2.7□□□□□ -1.98
VPS13CQ709C8 AC020914.4-201ENST00000597690 277 ntBASIC2.7□□□□□ -1.98
VPS13CQ709C8 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS13CQ709C8 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
VPS13CQ709C8 RNU1-108P-201ENST00000362556 161 ntBASIC2.7□□□□□ -1.98
VPS13CQ709C8 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS13CQ709C8 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.7□□□□□ -1.98
VPS13CQ709C8 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS13CQ709C8 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS13CQ709C8 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.7□□□□□ -1.98
VPS13CQ709C8 RPL7P47-201ENST00000497299 556 ntBASIC2.7□□□□□ -1.98
VPS13CQ709C8 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
VPS13CQ709C8 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS13CQ709C8 AC087241.4-201ENST00000612441 480 ntBASIC2.7□□□□□ -1.98
VPS13CQ709C8 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC2.7□□□□□ -1.98
VPS13CQ709C8 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
VPS13CQ709C8 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC2.7□□□□□ -1.98
VPS13CQ709C8 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC2.7□□□□□ -1.98
VPS13CQ709C8 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS13CQ709C8 RPL21P112-201ENST00000434403 463 ntBASIC2.7□□□□□ -1.98
VPS13CQ709C8 RPL7P36-201ENST00000444633 681 ntBASIC2.7□□□□□ -1.98
VPS13CQ709C8 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC2.7□□□□□ -1.98
VPS13CQ709C8 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.7□□□□□ -1.98
VPS13CQ709C8 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms