Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CYCSP17-201ENST00000407870 315 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 MIR548F5-201ENST00000408421 86 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 RNU2-8P-201ENST00000410727 190 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AC007283.2-201ENST00000424739 197 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AC096644.2-201ENST00000429278 159 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AC079807.1-201ENST00000429993 481 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AL356276.2-201ENST00000435919 558 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AC104651.2-201ENST00000447549 528 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AL136380.1-201ENST00000447970 162 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 RNU7-63P-201ENST00000459054 62 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 RPS27P23-201ENST00000487608 251 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 RPS4XP18-201ENST00000495480 763 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 HMGB3P17-201ENST00000504195 649 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AC008945.1-201ENST00000505144 499 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AC091885.1-201ENST00000506658 268 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 MRPS35P2-201ENST00000508242 191 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 Y_RNA.665-201ENST00000516177 98 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 Y_RNA.682-201ENST00000516457 100 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AC009812.2-201ENST00000517657 457 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AC027309.2-201ENST00000520566 192 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AC084121.1-201ENST00000533882 835 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 OR4T1P-201ENST00000554933 911 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 TVP23CP2-201ENST00000571473 623 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 FAM106CP-201ENST00000582212 507 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AL162373.1-201ENST00000620433 407 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AC069234.4-201ENST00000621276 412 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 ZNF807-201ENST00000328088 1707 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AC032011.1-201ENST00000611703 1549 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 SPATA2P1-201ENST00000431223 2055 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 LINC00561-201ENST00000565815 2738 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 AP004289.2-201ENST00000444413 1457 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 OR9K1P-202ENST00000641111 3217 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 SNORA20.2-201ENST00000383922 131 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 BTBD10P2-201ENST00000404779 676 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 AL590635.1-201ENST00000406314 586 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 AC015977.1-201ENST00000418887 292 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 SDAD1P3-201ENST00000427380 333 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 AC239367.3-201ENST00000428996 814 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 RPL31P44-201ENST00000447680 377 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 MIR2053-201ENST00000459295 91 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 RN7SL39P-201ENST00000462264 297 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 RPL7P22-201ENST00000466005 733 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 AC104687.1-201ENST00000485829 412 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 RPL32P9-201ENST00000487963 407 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 MTCO1P29-201ENST00000496868 288 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 AC091849.1-201ENST00000509920 121 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 RNU6-635P-201ENST00000516651 102 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 AC009902.1-201ENST00000519351 183 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 AP000676.2-201ENST00000529711 301 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 155.7 ms