Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NIPAL3Q6P499 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.79□□□□□ -1.8
NIPAL3Q6P499 VWA8P1-201ENST00000510889 176 ntBASIC3.79□□□□□ -1.8
NIPAL3Q6P499 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.79□□□□□ -1.8
NIPAL3Q6P499 PTGES3P3-201ENST00000511479 482 ntBASIC3.79□□□□□ -1.8
NIPAL3Q6P499 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.79□□□□□ -1.8
NIPAL3Q6P499 RNA5SP519-201ENST00000516480 119 ntBASIC3.79□□□□□ -1.8
NIPAL3Q6P499 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.79□□□□□ -1.8
NIPAL3Q6P499 AF279873.1-201ENST00000523393 313 ntBASIC3.79□□□□□ -1.8
NIPAL3Q6P499 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
NIPAL3Q6P499 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.79□□□□□ -1.8
NIPAL3Q6P499 AC063950.1-201ENST00000552036 308 ntBASIC3.79□□□□□ -1.8
NIPAL3Q6P499 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.79□□□□□ -1.8
NIPAL3Q6P499 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.79□□□□□ -1.8
NIPAL3Q6P499 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.79□□□□□ -1.8
NIPAL3Q6P499 AC092474.3-201ENST00000603022 568 ntBASIC3.79□□□□□ -1.8
NIPAL3Q6P499 BNIP3P4-201ENST00000604946 565 ntBASIC3.79□□□□□ -1.8
NIPAL3Q6P499 AC114781.5-201ENST00000615297 108 ntBASIC3.79□□□□□ -1.8
NIPAL3Q6P499 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.79□□□□□ -1.8
NIPAL3Q6P499 AC095038.2-201ENST00000621464 1070 ntBASIC3.79□□□□□ -1.8
NIPAL3Q6P499 AC006065.5-201ENST00000623427 349 ntBASIC3.79□□□□□ -1.8
NIPAL3Q6P499 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.79□□□□□ -1.8
NIPAL3Q6P499 MTCO1P14-201ENST00000441695 1559 ntBASIC3.79□□□□□ -1.8
NIPAL3Q6P499 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.79□□□□□ -1.8
NIPAL3Q6P499 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NIPAL3Q6P499 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NIPAL3Q6P499 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 MTCO1P6-201ENST00000481192 1384 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AC018555.1-201ENST00000567548 1980 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 RNU1-14P-201ENST00000362759 152 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 GCNT6-201ENST00000379591 934 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AP002784.2-201ENST00000397300 549 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 BTBD10P2-201ENST00000404779 676 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 SNORA3C-201ENST00000408792 125 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 RN7SKP235-201ENST00000410662 305 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 FAR2P2-201ENST00000413041 594 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 FAR2P4-202ENST00000425399 584 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 YWHAZP8-201ENST00000436935 731 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AL096803.2-201ENST00000450032 677 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 HMGB3P22-202ENST00000451823 572 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AL121877.1-201ENST00000453704 622 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AC007688.1-201ENST00000475592 759 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AC106806.2-201ENST00000509365 500 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AC121161.1-201ENST00000510606 652 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 RNA5SP49-201ENST00000516450 115 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 OR8L1P-201ENST00000534005 955 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AC011611.5-201ENST00000552477 578 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AC007599.1-201ENST00000568688 1174 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AC008687.2-201ENST00000597865 520 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AC026741.1-201ENST00000605892 482 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 RNA5SP108-201ENST00000605921 117 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AC103858.2-201ENST00000621471 543 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AC107081.3-201ENST00000612715 2034 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AL356489.2-201ENST00000566968 3528 ntBASIC3.78□□□□□ -1.8
NIPAL3Q6P499 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
NIPAL3Q6P499 AL133412.1-201ENST00000380194 2992 ntBASIC3.78□□□□□ -1.81
NIPAL3Q6P499 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
NIPAL3Q6P499 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.78□□□□□ -1.81
NIPAL3Q6P499 IQCB2P-201ENST00000401788 1633 ntBASIC3.77□□□□□ -1.81
NIPAL3Q6P499 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NIPAL3Q6P499 AC073055.1-201ENST00000456901 1621 ntBASIC3.77□□□□□ -1.81
NIPAL3Q6P499 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
NIPAL3Q6P499 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.77□□□□□ -1.81
NIPAL3Q6P499 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NIPAL3Q6P499 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NIPAL3Q6P499 OR11H5P-202ENST00000641612 1325 ntBASIC3.77□□□□□ -1.81
NIPAL3Q6P499 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
NIPAL3Q6P499 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.77□□□□□ -1.81
NIPAL3Q6P499 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.77□□□□□ -1.81
NIPAL3Q6P499 Y_RNA.110-201ENST00000363220 99 ntBASIC3.77□□□□□ -1.81
NIPAL3Q6P499 RNU1-132P-201ENST00000364300 164 ntBASIC3.77□□□□□ -1.81
NIPAL3Q6P499 SNORA37-201ENST00000384504 129 ntBASIC3.77□□□□□ -1.81
NIPAL3Q6P499 DSTNP4-201ENST00000399472 474 ntBASIC3.77□□□□□ -1.81
NIPAL3Q6P499 RPL23AP26-201ENST00000412728 464 ntBASIC3.77□□□□□ -1.81
NIPAL3Q6P499 BX664727.1-201ENST00000416024 466 ntBASIC3.77□□□□□ -1.81
NIPAL3Q6P499 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.77□□□□□ -1.81
NIPAL3Q6P499 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.77□□□□□ -1.81
NIPAL3Q6P499 OR51AB1P-201ENST00000429046 620 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms