Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 SNORA51.12-201ENST00000384448 134 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 RNU6-1300P-201ENST00000391046 108 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 RNA5SP241-201ENST00000391326 114 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AL590084.2-201ENST00000401481 382 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AL139098.1-201ENST00000407291 389 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 CENPIP1-201ENST00000425713 902 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 MTCO3P30-201ENST00000426425 670 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 NPM1P24-201ENST00000428039 894 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 DLGAP5P1-201ENST00000430307 464 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 BX323845.1-201ENST00000432417 179 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AC010153.1-201ENST00000432862 727 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 RPL19P16-201ENST00000433839 588 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 RPL10P17-201ENST00000453852 316 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 USP9YP10-201ENST00000454868 628 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 RPL5P24-201ENST00000463742 885 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 RPL7P18-201ENST00000478965 734 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 ARL4AP1-201ENST00000503220 705 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AC097173.1-201ENST00000505862 819 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 USP9YP5-201ENST00000511770 630 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 RNU6-202P-201ENST00000515998 96 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 RN7SKP31-201ENST00000516354 278 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 RNA5SP360-201ENST00000516555 118 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AC027807.1-201ENST00000559921 996 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AC116553.2-201ENST00000564203 463 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 MIR7853-201ENST00000584820 132 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AC010200.2-201ENST00000605098 235 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AC096553.1-201ENST00000605169 829 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AL355816.1-201ENST00000607951 118 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AL353600.1-201ENST00000608148 251 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AC006338.2-201ENST00000616864 791 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AC073348.1-201ENST00000623002 331 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 AC124312.6-202ENST00000623624 418 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A4Q53GD3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 RNU6-623P-201ENST00000363143 105 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 SNORD116-23-201ENST00000384645 92 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 RPL21P67-201ENST00000402896 478 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 RPL12P9-201ENST00000412942 488 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AL136133.1-201ENST00000413694 376 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 RPS27AP7-201ENST00000422792 455 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 NRBF2P3-201ENST00000432731 865 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AL450263.2-201ENST00000439400 589 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 MTCYBP34-201ENST00000439552 670 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 MTCO2P25-201ENST00000447065 681 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 MTND2P19-201ENST00000449129 1012 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 RPL23AP15-201ENST00000450202 459 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 RPS27AP8-201ENST00000452665 445 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AURKAPS2-201ENST00000454983 333 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 PNPLA4P1-201ENST00000458328 305 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 RPL31P3-201ENST00000458430 332 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 RPS24P16-201ENST00000497294 392 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 RPF2P2-201ENST00000504693 896 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AC111000.2-201ENST00000507775 550 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 HSPE1P23-201ENST00000509838 286 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 HMGB3P13-201ENST00000511263 607 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AC010625.1-201ENST00000511296 403 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms