Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CCDC58Q4VC31 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
CCDC58Q4VC31 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC58Q4VC31 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC58Q4VC31 AC058791.1-201ENST00000608412 3198 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC58Q4VC31 RNA5SP295-201ENST00000362655 121 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 SNORA73.2-201ENST00000364946 201 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 AC009965.2-201ENST00000425328 970 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 AL390879.2-203ENST00000426943 1121 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 DPPA2P1-201ENST00000428060 556 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 ELOCP6-201ENST00000429066 328 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 Z74696.2-201ENST00000436514 498 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 TBCAP1-201ENST00000436520 327 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 HMGN2P21-201ENST00000447764 270 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC58Q4VC31 NDUFA12P1-201ENST00000455914 406 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 ELOCP12-201ENST00000458706 328 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 AC087312.1-201ENST00000471411 480 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC58Q4VC31 AC110792.1-201ENST00000491826 472 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC58Q4VC31 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC58Q4VC31 RNA5SP208-201ENST00000516156 78 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC58Q4VC31 MIR5096-201ENST00000583713 70 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC58Q4VC31 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC58Q4VC31 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC58Q4VC31 SNORA62.6-201ENST00000606322 83 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC58Q4VC31 AC123768.4-201ENST00000616244 701 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 AC073530.2-201ENST00000623987 261 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 AF001550.2-201ENST00000636643 217 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 AL732372.2-225ENST00000642124 456 ntBASIC3.3□□□□□ -1.88
CCDC58Q4VC31 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC58Q4VC31 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC58Q4VC31 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 AC073429.2-201ENST00000569694 1444 ntBASIC3.29□□□□□ -1.88
CCDC58Q4VC31 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 RNU6-55P-201ENST00000411092 107 ntBASIC3.29□□□□□ -1.88
CCDC58Q4VC31 RNU6-954P-201ENST00000411355 107 ntBASIC3.29□□□□□ -1.88
CCDC58Q4VC31 HMGB3P20-201ENST00000417997 600 ntBASIC3.29□□□□□ -1.88
CCDC58Q4VC31 RPL31P45-201ENST00000419532 356 ntBASIC3.29□□□□□ -1.88
CCDC58Q4VC31 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 GTF2IP23-201ENST00000423746 351 ntBASIC3.29□□□□□ -1.88
CCDC58Q4VC31 NPM1P24-201ENST00000428039 894 ntBASIC3.29□□□□□ -1.88
CCDC58Q4VC31 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 OR2B8P-201ENST00000432841 938 ntBASIC3.29□□□□□ -1.88
CCDC58Q4VC31 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 AC089999.1-201ENST00000460336 374 ntBASIC3.29□□□□□ -1.88
CCDC58Q4VC31 RN7SL610P-201ENST00000463845 291 ntBASIC3.29□□□□□ -1.88
CCDC58Q4VC31 ACTG1P13-201ENST00000486987 1043 ntBASIC3.29□□□□□ -1.88
CCDC58Q4VC31 RPS3AP50-201ENST00000487064 803 ntBASIC3.29□□□□□ -1.88
CCDC58Q4VC31 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 AC114967.1-201ENST00000504890 259 ntBASIC3.29□□□□□ -1.88
CCDC58Q4VC31 AC106806.2-201ENST00000509365 500 ntBASIC3.29□□□□□ -1.88
CCDC58Q4VC31 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.29□□□□□ -1.88
CCDC58Q4VC31 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 AP001636.2-201ENST00000525517 696 ntBASIC3.29□□□□□ -1.88
CCDC58Q4VC31 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 AC008507.1-201ENST00000587506 734 ntBASIC3.29□□□□□ -1.88
CCDC58Q4VC31 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 RNU4-89P-201ENST00000607443 133 ntBASIC3.29□□□□□ -1.88
CCDC58Q4VC31 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 AC073073.2-201ENST00000609827 2578 ntBASIC3.29□□□□□ -1.88
CCDC58Q4VC31 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC58Q4VC31 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 SNORA31-201ENST00000362607 130 ntBASIC3.28□□□□□ -1.88
CCDC58Q4VC31 DYNLT3P1-201ENST00000378574 347 ntBASIC3.28□□□□□ -1.88
CCDC58Q4VC31 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 NDUFB4P5-201ENST00000415445 361 ntBASIC3.28□□□□□ -1.88
CCDC58Q4VC31 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 AC048351.1-201ENST00000420064 602 ntBASIC3.28□□□□□ -1.88
CCDC58Q4VC31 AC007394.1-201ENST00000421941 531 ntBASIC3.28□□□□□ -1.88
CCDC58Q4VC31 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC58Q4VC31 AL592293.2-201ENST00000422292 996 ntBASIC3.28□□□□□ -1.88
CCDC58Q4VC31 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms