Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL512506.2-201ENST00000624472 458 ntBASIC4.04□□□□□ -1.76
SCN1BQ07699 AF001550.2-201ENST00000636643 217 ntBASIC4.04□□□□□ -1.76
SCN1BQ07699 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SCN1BQ07699 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SCN1BQ07699 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SCN1BQ07699 DHX40P1-201ENST00000588725 1412 ntBASIC4.04□□□□□ -1.76
SCN1BQ07699 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCN1BQ07699 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.03□□□□□ -1.76
SCN1BQ07699 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.03□□□□□ -1.76
SCN1BQ07699 DBF4P1-201ENST00000412976 1892 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.03□□□□□ -1.76
SCN1BQ07699 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCN1BQ07699 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SCN1BQ07699 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SCN1BQ07699 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.03□□□□□ -1.76
SCN1BQ07699 RN7SKP115-201ENST00000363177 317 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 RNU1-130P-201ENST00000363930 160 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 MIR765-201ENST00000390226 114 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 RNU1-82P-201ENST00000390851 165 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.03□□□□□ -1.76
SCN1BQ07699 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCN1BQ07699 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.03□□□□□ -1.76
SCN1BQ07699 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.03□□□□□ -1.76
SCN1BQ07699 BOLA3P4-201ENST00000418151 400 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.03□□□□□ -1.76
SCN1BQ07699 OFD1P18Y-201ENST00000420889 959 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 Z93242.1-201ENST00000427102 353 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 AL035410.1-201ENST00000427409 427 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 RBMY2QP-201ENST00000429799 1147 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.03□□□□□ -1.76
SCN1BQ07699 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.03□□□□□ -1.76
SCN1BQ07699 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.03□□□□□ -1.76
SCN1BQ07699 GSTA7P-201ENST00000438425 448 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 CEACAMP7-201ENST00000444105 496 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 MTCYBP42-201ENST00000444653 1130 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 HMGB1P16-201ENST00000447155 540 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 OR2AF1P-201ENST00000454899 889 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 AC010307.1-201ENST00000467206 836 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 AC074386.1-201ENST00000476560 767 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SCN1BQ07699 AC078918.1-201ENST00000498515 228 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 AC006499.3-201ENST00000506077 748 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.03□□□□□ -1.76
SCN1BQ07699 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.03□□□□□ -1.76
SCN1BQ07699 MTCYBP37-201ENST00000510642 1133 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 MTCO3P44-201ENST00000510977 541 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.03□□□□□ -1.76
SCN1BQ07699 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.03□□□□□ -1.76
SCN1BQ07699 SCARNA21.2-201ENST00000516600 166 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 IGHV3-32-201ENST00000519182 355 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 ARL2BPP5-201ENST00000523141 481 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.03□□□□□ -1.76
SCN1BQ07699 AC090616.5-202ENST00000582111 297 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.03□□□□□ -1.76
SCN1BQ07699 AC020910.3-201ENST00000603701 874 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 AC098935.2-201ENST00000604222 466 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 AC073387.2-201ENST00000604797 784 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.03□□□□□ -1.76
SCN1BQ07699 AF129408.1-201ENST00000608767 431 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 AC099676.1-201ENST00000608886 657 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 AC007497.1-201ENST00000610421 561 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 FAM27B-201ENST00000610601 213 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 AC026368.1-201ENST00000614934 690 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 AC090116.1-201ENST00000615679 446 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.03□□□□□ -1.76
SCN1BQ07699 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.03□□□□□ -1.76
SCN1BQ07699 AC013437.2-201ENST00000639587 677 ntBASIC4.03□□□□□ -1.76
SCN1BQ07699 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.03□□□□□ -1.76
SCN1BQ07699 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCN1BQ07699 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SCN1BQ07699 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCN1BQ07699 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SCN1BQ07699 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCN1BQ07699 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCN1BQ07699 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCN1BQ07699 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.03□□□□□ -1.76
SCN1BQ07699 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
SCN1BQ07699 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.77
SCN1BQ07699 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SCN1BQ07699 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCN1BQ07699 AC000367.1-201ENST00000452711 1766 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SCN1BQ07699 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SCN1BQ07699 RNA5SP123-201ENST00000363244 119 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 RNU6-707P-201ENST00000364647 95 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 RNA5SP151-201ENST00000365632 117 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
SCN1BQ07699 AL079342.2-201ENST00000403367 482 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 RN7SKP213-201ENST00000410746 298 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.02□□□□□ -1.77
SCN1BQ07699 MTND4P3-201ENST00000417829 541 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 RBMY2KP-201ENST00000418221 992 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 AC092634.6-201ENST00000418558 192 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 RPL7P53-201ENST00000421245 739 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 AL391219.1-201ENST00000422570 483 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 RPS6P14-201ENST00000425165 719 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.02□□□□□ -1.77
SCN1BQ07699 RPL31P54-201ENST00000429803 370 ntBASIC4.02□□□□□ -1.77
SCN1BQ07699 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms