Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.46□□□□□ -1.7
GABPAQ06546 AL390816.3-201ENST00000604527 1066 ntBASIC4.46□□□□□ -1.7
GABPAQ06546 AC011472.4-201ENST00000615848 491 ntBASIC4.46□□□□□ -1.7
GABPAQ06546 AL591424.2-201ENST00000617023 128 ntBASIC4.46□□□□□ -1.7
GABPAQ06546 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.46□□□□□ -1.7
GABPAQ06546 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.46□□□□□ -1.7
GABPAQ06546 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
GABPAQ06546 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
GABPAQ06546 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.45□□□□□ -1.7
GABPAQ06546 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
GABPAQ06546 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
GABPAQ06546 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
GABPAQ06546 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
GABPAQ06546 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
GABPAQ06546 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
GABPAQ06546 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
GABPAQ06546 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
GABPAQ06546 MIR513A2-201ENST00000385249 127 ntBASIC4.45□□□□□ -1.7
GABPAQ06546 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
GABPAQ06546 AC010385.1-201ENST00000412374 256 ntBASIC4.45□□□□□ -1.7
GABPAQ06546 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.45□□□□□ -1.7
GABPAQ06546 AL050321.1-201ENST00000432363 400 ntBASIC4.45□□□□□ -1.7
GABPAQ06546 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.45□□□□□ -1.7
GABPAQ06546 RPL34P26-201ENST00000445636 354 ntBASIC4.45□□□□□ -1.7
GABPAQ06546 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.45□□□□□ -1.7
GABPAQ06546 AC018635.1-201ENST00000468292 1030 ntBASIC4.45□□□□□ -1.7
GABPAQ06546 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
GABPAQ06546 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.45□□□□□ -1.7
GABPAQ06546 RNA5SP208-201ENST00000516156 78 ntBASIC4.45□□□□□ -1.7
GABPAQ06546 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.45□□□□□ -1.7
GABPAQ06546 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
GABPAQ06546 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.45□□□□□ -1.7
GABPAQ06546 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.45□□□□□ -1.7
GABPAQ06546 AC025918.2-201ENST00000558683 763 ntBASIC4.45□□□□□ -1.7
GABPAQ06546 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.45□□□□□ -1.7
GABPAQ06546 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.45□□□□□ -1.7
GABPAQ06546 AC008739.3-201ENST00000603262 127 ntBASIC4.45□□□□□ -1.7
GABPAQ06546 AC090525.3-201ENST00000605601 189 ntBASIC4.45□□□□□ -1.7
GABPAQ06546 AC128687.2-201ENST00000609657 566 ntBASIC4.45□□□□□ -1.7
GABPAQ06546 AC006213.5-201ENST00000619673 288 ntBASIC4.45□□□□□ -1.7
GABPAQ06546 AC007342.8-201ENST00000623278 678 ntBASIC4.45□□□□□ -1.7
GABPAQ06546 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
GABPAQ06546 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.45□□□□□ -1.7
GABPAQ06546 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
GABPAQ06546 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
GABPAQ06546 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
GABPAQ06546 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
GABPAQ06546 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
GABPAQ06546 ZNF90P1-201ENST00000480493 1951 ntBASIC4.44□□□□□ -1.7
GABPAQ06546 MIR208A-201ENST00000362287 71 ntBASIC4.44□□□□□ -1.7
GABPAQ06546 RNU6-650P-201ENST00000365658 111 ntBASIC4.44□□□□□ -1.7
GABPAQ06546 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
GABPAQ06546 AC048351.1-201ENST00000420064 602 ntBASIC4.44□□□□□ -1.7
GABPAQ06546 MTND2P11-201ENST00000423638 648 ntBASIC4.44□□□□□ -1.7
GABPAQ06546 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
GABPAQ06546 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
GABPAQ06546 AC074367.1-201ENST00000438685 1125 ntBASIC4.44□□□□□ -1.7
GABPAQ06546 SETD6P1-201ENST00000444575 317 ntBASIC4.44□□□□□ -1.7
GABPAQ06546 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.44□□□□□ -1.7
GABPAQ06546 RN7SL809P-201ENST00000482040 297 ntBASIC4.44□□□□□ -1.7
GABPAQ06546 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.44□□□□□ -1.7
GABPAQ06546 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.44□□□□□ -1.7
GABPAQ06546 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.44□□□□□ -1.7
GABPAQ06546 HMGN1P15-201ENST00000513870 295 ntBASIC4.44□□□□□ -1.7
GABPAQ06546 OSBPL9P3-201ENST00000534523 595 ntBASIC4.44□□□□□ -1.7
GABPAQ06546 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.44□□□□□ -1.7
GABPAQ06546 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.44□□□□□ -1.7
GABPAQ06546 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.44□□□□□ -1.7
GABPAQ06546 AC024220.1-201ENST00000603675 484 ntBASIC4.44□□□□□ -1.7
GABPAQ06546 AC133552.5-201ENST00000604266 540 ntBASIC4.44□□□□□ -1.7
GABPAQ06546 AL137849.1-201ENST00000604767 169 ntBASIC4.44□□□□□ -1.7
GABPAQ06546 RPL21P136-201ENST00000605378 396 ntBASIC4.44□□□□□ -1.7
GABPAQ06546 AC131238.1-201ENST00000617135 328 ntBASIC4.44□□□□□ -1.7
GABPAQ06546 uc_338.9-201ENST00000617424 182 ntBASIC4.44□□□□□ -1.7
GABPAQ06546 AL445493.3-201ENST00000619568 477 ntBASIC4.44□□□□□ -1.7
GABPAQ06546 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.44□□□□□ -1.7
GABPAQ06546 ZNF962P-201ENST00000443465 3140 ntBASIC4.44□□□□□ -1.7
GABPAQ06546 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
GABPAQ06546 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.44□□□□□ -1.7
GABPAQ06546 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
GABPAQ06546 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.44□□□□□ -1.7
GABPAQ06546 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
GABPAQ06546 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.43□□□□□ -1.7
GABPAQ06546 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 AC009313.2-201ENST00000417893 1941 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 IPO8P1-201ENST00000455509 3109 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
GABPAQ06546 Y_RNA.110-201ENST00000363220 99 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
GABPAQ06546 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
GABPAQ06546 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.43□□□□□ -1.7
GABPAQ06546 RNU4-31P-201ENST00000384211 141 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 RNU6-452P-201ENST00000384406 107 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 RNU6-185P-201ENST00000384421 107 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 ATP5A1P2-201ENST00000412323 255 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.43□□□□□ -1.7
GABPAQ06546 AL121882.1-201ENST00000422893 417 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.43□□□□□ -1.7
GABPAQ06546 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.43□□□□□ -1.7
GABPAQ06546 FO393419.3-201ENST00000428741 282 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms