Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 AL390816.3-201ENST00000604527 1066 ntBASIC2.9□□□□□ -1.95
HIST1H1AQ02539 AC005156.1-201ENST00000613371 573 ntBASIC2.9□□□□□ -1.95
HIST1H1AQ02539 AC016957.2-201ENST00000616998 848 ntBASIC2.9□□□□□ -1.95
HIST1H1AQ02539 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 RLIMP1-201ENST00000339626 1680 ntBASIC2.89□□□□□ -1.95
HIST1H1AQ02539 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 HMGB1P10-201ENST00000395823 563 ntBASIC2.89□□□□□ -1.95
HIST1H1AQ02539 AP000567.1-201ENST00000406413 156 ntBASIC2.89□□□□□ -1.95
HIST1H1AQ02539 SNORA57.3-201ENST00000411095 141 ntBASIC2.89□□□□□ -1.95
HIST1H1AQ02539 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.89□□□□□ -1.95
HIST1H1AQ02539 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 CALM1P2-201ENST00000452941 448 ntBASIC2.89□□□□□ -1.95
HIST1H1AQ02539 PTGES3P5-201ENST00000455109 434 ntBASIC2.89□□□□□ -1.95
HIST1H1AQ02539 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 AC010618.1-201ENST00000469924 477 ntBASIC2.89□□□□□ -1.95
HIST1H1AQ02539 RPL21P103-201ENST00000479921 488 ntBASIC2.89□□□□□ -1.95
HIST1H1AQ02539 TRBV12-2-201ENST00000489763 344 ntBASIC2.89□□□□□ -1.95
HIST1H1AQ02539 AC078918.1-201ENST00000498515 228 ntBASIC2.89□□□□□ -1.95
HIST1H1AQ02539 FTH1P24-201ENST00000503502 462 ntBASIC2.89□□□□□ -1.95
HIST1H1AQ02539 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 OR5H4P-201ENST00000510851 923 ntBASIC2.89□□□□□ -1.95
HIST1H1AQ02539 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 AC087369.1-201ENST00000520775 996 ntBASIC2.89□□□□□ -1.95
HIST1H1AQ02539 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 AC025423.2-201ENST00000537570 439 ntBASIC2.89□□□□□ -1.95
HIST1H1AQ02539 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 IGKV1OR2-118-201ENST00000603238 347 ntBASIC2.89□□□□□ -1.95
HIST1H1AQ02539 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 AC112484.5-201ENST00000624189 228 ntBASIC2.89□□□□□ -1.95
HIST1H1AQ02539 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.89□□□□□ -1.95
HIST1H1AQ02539 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 RPL32P3-201ENST00000359025 275 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 RNA5SP443-201ENST00000363083 132 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 SNORA70C-201ENST00000384538 135 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 MT-TP-201ENST00000387461 68 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AL391417.1-201ENST00000404100 426 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AC016397.1-201ENST00000412463 242 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AC010740.1-201ENST00000417035 684 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AC016712.1-201ENST00000431088 378 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 RPS7P7-201ENST00000463499 571 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AP002371.1-201ENST00000463604 433 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 RPL7P19-201ENST00000469948 618 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 NDUFA5P9-201ENST00000472609 340 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 CYCSP20-201ENST00000473154 315 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 RPS3AP6-201ENST00000484430 795 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AC092185.1-201ENST00000491371 97 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 PCBP2P3-201ENST00000509726 843 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 LLPHP1-201ENST00000603571 367 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AL137849.1-201ENST00000604767 169 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AL023583.1-201ENST00000607518 1143 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AL354760.1-201ENST00000608357 643 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AC105429.2-201ENST00000610567 517 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AC005962.2-201ENST00000611427 652 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 MIR6716-201ENST00000613413 80 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms