Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGCS1Q01581 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.64□□□□□ -1.83
HMGCS1Q01581 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.64□□□□□ -1.83
HMGCS1Q01581 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.64□□□□□ -1.83
HMGCS1Q01581 OR8F1P-201ENST00000425243 930 ntBASIC3.64□□□□□ -1.83
HMGCS1Q01581 RPL21P133-201ENST00000443666 476 ntBASIC3.64□□□□□ -1.83
HMGCS1Q01581 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.64□□□□□ -1.83
HMGCS1Q01581 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.64□□□□□ -1.83
HMGCS1Q01581 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.64□□□□□ -1.83
HMGCS1Q01581 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.64□□□□□ -1.83
HMGCS1Q01581 OR52A4P-202ENST00000481634 799 ntBASIC3.64□□□□□ -1.83
HMGCS1Q01581 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.64□□□□□ -1.83
HMGCS1Q01581 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.64□□□□□ -1.83
HMGCS1Q01581 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.64□□□□□ -1.83
HMGCS1Q01581 AC146944.2-203ENST00000502493 354 ntBASIC3.64□□□□□ -1.83
HMGCS1Q01581 HMGB1P3-201ENST00000502802 616 ntBASIC3.64□□□□□ -1.83
HMGCS1Q01581 AC108941.1-201ENST00000502853 530 ntBASIC3.64□□□□□ -1.83
HMGCS1Q01581 AC139495.1-202ENST00000513164 354 ntBASIC3.64□□□□□ -1.83
HMGCS1Q01581 MIR2114-201ENST00000516645 80 ntBASIC3.64□□□□□ -1.83
HMGCS1Q01581 RNU6-352P-201ENST00000516908 107 ntBASIC3.64□□□□□ -1.83
HMGCS1Q01581 AC008802.1-201ENST00000519121 791 ntBASIC3.64□□□□□ -1.83
HMGCS1Q01581 HIGD1AP18-201ENST00000520730 278 ntBASIC3.64□□□□□ -1.83
HMGCS1Q01581 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.64□□□□□ -1.83
HMGCS1Q01581 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGCS1Q01581 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.64□□□□□ -1.83
HMGCS1Q01581 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
HMGCS1Q01581 AF001550.2-201ENST00000636643 217 ntBASIC3.64□□□□□ -1.83
HMGCS1Q01581 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HMGCS1Q01581 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HMGCS1Q01581 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.64□□□□□ -1.83
HMGCS1Q01581 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGCS1Q01581 AC096656.1-201ENST00000623826 1364 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.63□□□□□ -1.83
HMGCS1Q01581 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.63□□□□□ -1.83
HMGCS1Q01581 CR381670.1-201ENST00000624291 1693 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.63□□□□□ -1.83
HMGCS1Q01581 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
HMGCS1Q01581 RNU6-244P-201ENST00000391028 104 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGCS1Q01581 MIR1193-201ENST00000408109 78 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 AC013404.1-201ENST00000413068 249 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 RPL30P3-201ENST00000424262 333 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGCS1Q01581 AL157827.1-201ENST00000447622 132 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.63□□□□□ -1.83
HMGCS1Q01581 RPL21P71-201ENST00000465598 459 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 RPL23AP12-201ENST00000467573 473 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGCS1Q01581 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGCS1Q01581 AC093770.1-201ENST00000511559 571 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 RN7SKP83-201ENST00000516512 178 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 RNU6-1308P-201ENST00000516817 103 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGCS1Q01581 CBX3P5-201ENST00000552017 521 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGCS1Q01581 VN1R79P-201ENST00000593540 513 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 AL049844.2-201ENST00000604280 628 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 AP004372.1-201ENST00000604842 844 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 SNORA62.6-201ENST00000606322 83 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 AC012467.1-201ENST00000607740 256 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 AL354760.1-201ENST00000608357 643 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 AL118556.2-201ENST00000614375 824 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 MIR6875-201ENST00000617506 72 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.63□□□□□ -1.83
HMGCS1Q01581 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.63□□□□□ -1.83
HMGCS1Q01581 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.63□□□□□ -1.83
HMGCS1Q01581 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGCS1Q01581 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGCS1Q01581 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HMGCS1Q01581 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
HMGCS1Q01581 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGCS1Q01581 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGCS1Q01581 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HMGCS1Q01581 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGCS1Q01581 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 RNU6-666P-201ENST00000363499 107 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HMGCS1Q01581 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGCS1Q01581 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 RPL7P53-201ENST00000421245 739 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 HIGD1AP12-201ENST00000427832 281 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 CYCSP53-201ENST00000455540 265 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 AC006511.1-201ENST00000470614 315 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 MTCO1P31-201ENST00000506355 492 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 AC010460.1-201ENST00000507087 466 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 AC020593.1-201ENST00000507399 299 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 AC108157.1-201ENST00000510511 539 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 AC108043.1-201ENST00000512696 574 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms