Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HIST1H3AP68431 SYT14P1-202ENST00000600441 1448 ntBASIC3.26□□□□□ -1.89
HIST1H3AP68431 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HIST1H3AP68431 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HIST1H3AP68431 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.26□□□□□ -1.89
HIST1H3AP68431 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HIST1H3AP68431 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
HIST1H3AP68431 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HIST1H3AP68431 DCAF13P1-201ENST00000495256 1330 ntBASIC3.25□□□□□ -1.89
HIST1H3AP68431 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HIST1H3AP68431 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 CR381670.1-201ENST00000624291 1693 ntBASIC3.25□□□□□ -1.89
HIST1H3AP68431 RNA5SP167-201ENST00000365461 116 ntBASIC3.25□□□□□ -1.89
HIST1H3AP68431 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HIST1H3AP68431 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HIST1H3AP68431 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HIST1H3AP68431 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 MIR30B-201ENST00000384850 88 ntBASIC3.25□□□□□ -1.89
HIST1H3AP68431 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 RPL30P2-201ENST00000414021 291 ntBASIC3.25□□□□□ -1.89
HIST1H3AP68431 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 PTP4A1P5-201ENST00000420305 455 ntBASIC3.25□□□□□ -1.89
HIST1H3AP68431 TCEA1P2-201ENST00000420496 906 ntBASIC3.25□□□□□ -1.89
HIST1H3AP68431 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 NDUFB1P1-201ENST00000435191 180 ntBASIC3.25□□□□□ -1.89
HIST1H3AP68431 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 MTCO3P16-201ENST00000454456 754 ntBASIC3.25□□□□□ -1.89
HIST1H3AP68431 HMGN2P7-201ENST00000456186 273 ntBASIC3.25□□□□□ -1.89
HIST1H3AP68431 RPL23AP14-201ENST00000468281 468 ntBASIC3.25□□□□□ -1.89
HIST1H3AP68431 AL139099.1-201ENST00000497398 403 ntBASIC3.25□□□□□ -1.89
HIST1H3AP68431 SNX5P1-201ENST00000505757 1041 ntBASIC3.25□□□□□ -1.89
HIST1H3AP68431 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.25□□□□□ -1.89
HIST1H3AP68431 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 AL121766.1-201ENST00000547436 487 ntBASIC3.25□□□□□ -1.89
HIST1H3AP68431 NF1P5-201ENST00000588287 448 ntBASIC3.25□□□□□ -1.89
HIST1H3AP68431 KLKP1-201ENST00000595979 403 ntBASIC3.25□□□□□ -1.89
HIST1H3AP68431 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HIST1H3AP68431 AC092653.1-201ENST00000608509 531 ntBASIC3.25□□□□□ -1.89
HIST1H3AP68431 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HIST1H3AP68431 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HIST1H3AP68431 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HIST1H3AP68431 MIR6810-201ENST00000622701 70 ntBASIC3.25□□□□□ -1.89
HIST1H3AP68431 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HIST1H3AP68431 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HIST1H3AP68431 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HIST1H3AP68431 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HIST1H3AP68431 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
HIST1H3AP68431 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H3AP68431 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H3AP68431 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H3AP68431 FAM91A3P-201ENST00000456826 2544 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.24□□□□□ -1.89
HIST1H3AP68431 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HIST1H3AP68431 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HIST1H3AP68431 RNU6-532P-201ENST00000384318 107 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 MTHFD2P2-201ENST00000407725 247 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 RNU6-628P-201ENST00000410675 107 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 AL139247.1-201ENST00000422768 325 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.24□□□□□ -1.89
HIST1H3AP68431 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.24□□□□□ -1.89
HIST1H3AP68431 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.24□□□□□ -1.89
HIST1H3AP68431 NANOGP10-201ENST00000453325 895 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 AC099563.1-201ENST00000456086 418 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.24□□□□□ -1.89
HIST1H3AP68431 RNU7-170P-201ENST00000459303 61 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 RPL7P48-201ENST00000461513 746 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 AL133162.1-201ENST00000463228 453 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 AC092451.1-201ENST00000480211 153 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 RPL23AP73-201ENST00000492507 471 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.24□□□□□ -1.89
HIST1H3AP68431 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.24□□□□□ -1.89
HIST1H3AP68431 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.24□□□□□ -1.89
HIST1H3AP68431 RN7SKP21-201ENST00000516503 220 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 OR7E13P-201ENST00000526052 910 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 AL121576.1-201ENST00000556055 276 ntBASIC3.24□□□□□ -1.89
HIST1H3AP68431 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.24□□□□□ -1.89
HIST1H3AP68431 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.24□□□□□ -1.89
HIST1H3AP68431 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.24□□□□□ -1.89
HIST1H3AP68431 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.24□□□□□ -1.89
HIST1H3AP68431 AC022916.3-201ENST00000592961 742 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms