Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TPM4P67936 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
TPM4P67936 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TPM4P67936 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TPM4P67936 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.04□□□□□ -1.76
TPM4P67936 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
TPM4P67936 AC068647.1-201ENST00000489539 2265 ntBASIC4.04□□□□□ -1.76
TPM4P67936 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.04□□□□□ -1.76
TPM4P67936 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.04□□□□□ -1.76
TPM4P67936 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.04□□□□□ -1.76
TPM4P67936 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.04□□□□□ -1.76
TPM4P67936 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.04□□□□□ -1.76
TPM4P67936 RPS3AP46-201ENST00000448352 682 ntBASIC4.04□□□□□ -1.76
TPM4P67936 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.04□□□□□ -1.76
TPM4P67936 AC006511.1-201ENST00000470614 315 ntBASIC4.04□□□□□ -1.76
TPM4P67936 AC022034.3-201ENST00000471393 478 ntBASIC4.04□□□□□ -1.76
TPM4P67936 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.04□□□□□ -1.76
TPM4P67936 PHBP14-201ENST00000512887 367 ntBASIC4.04□□□□□ -1.76
TPM4P67936 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.04□□□□□ -1.76
TPM4P67936 RNU6-579P-201ENST00000516879 102 ntBASIC4.04□□□□□ -1.76
TPM4P67936 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.04□□□□□ -1.76
TPM4P67936 AC011602.1-201ENST00000546484 331 ntBASIC4.04□□□□□ -1.76
TPM4P67936 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.04□□□□□ -1.76
TPM4P67936 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.04□□□□□ -1.76
TPM4P67936 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.04□□□□□ -1.76
TPM4P67936 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TPM4P67936 AC243654.2-201ENST00000612843 443 ntBASIC4.04□□□□□ -1.76
TPM4P67936 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.04□□□□□ -1.76
TPM4P67936 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.04□□□□□ -1.76
TPM4P67936 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.04□□□□□ -1.76
TPM4P67936 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.04□□□□□ -1.76
TPM4P67936 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
TPM4P67936 AC025125.1-201ENST00000624743 1922 ntBASIC4.03□□□□□ -1.76
TPM4P67936 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.03□□□□□ -1.76
TPM4P67936 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TPM4P67936 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TPM4P67936 SNORA58B-201ENST00000364259 136 ntBASIC4.03□□□□□ -1.76
TPM4P67936 U3.39-201ENST00000408569 239 ntBASIC4.03□□□□□ -1.76
TPM4P67936 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.03□□□□□ -1.76
TPM4P67936 AC068533.1-201ENST00000418542 415 ntBASIC4.03□□□□□ -1.76
TPM4P67936 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.03□□□□□ -1.76
TPM4P67936 MTCYBP29-201ENST00000436327 1006 ntBASIC4.03□□□□□ -1.76
TPM4P67936 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.03□□□□□ -1.76
TPM4P67936 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.03□□□□□ -1.76
TPM4P67936 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.03□□□□□ -1.76
TPM4P67936 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.03□□□□□ -1.76
TPM4P67936 NDUFB4P9-201ENST00000511646 388 ntBASIC4.03□□□□□ -1.76
TPM4P67936 FABP5P12-201ENST00000515543 389 ntBASIC4.03□□□□□ -1.76
TPM4P67936 AC023161.2-201ENST00000551218 780 ntBASIC4.03□□□□□ -1.76
TPM4P67936 AC023575.1-201ENST00000580510 358 ntBASIC4.03□□□□□ -1.76
TPM4P67936 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TPM4P67936 AC006077.1-201ENST00000604746 343 ntBASIC4.03□□□□□ -1.76
TPM4P67936 AC103710.3-201ENST00000608157 948 ntBASIC4.03□□□□□ -1.76
TPM4P67936 AC110801.1-201ENST00000623590 212 ntBASIC4.03□□□□□ -1.76
TPM4P67936 OR52H1-202ENST00000641796 1061 ntBASIC4.03□□□□□ -1.76
TPM4P67936 ZNF826P-207ENST00000622273 1910 ntBASIC4.03□□□□□ -1.76
TPM4P67936 AC096656.1-201ENST00000623826 1364 ntBASIC4.02□□□□□ -1.77
TPM4P67936 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TPM4P67936 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.02□□□□□ -1.77
TPM4P67936 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
TPM4P67936 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TPM4P67936 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
TPM4P67936 AL022722.2-201ENST00000402519 180 ntBASIC4.02□□□□□ -1.77
TPM4P67936 AC013404.1-201ENST00000413068 249 ntBASIC4.02□□□□□ -1.77
TPM4P67936 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TPM4P67936 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.02□□□□□ -1.77
TPM4P67936 AL356095.1-201ENST00000417217 199 ntBASIC4.02□□□□□ -1.77
TPM4P67936 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.02□□□□□ -1.77
TPM4P67936 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TPM4P67936 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.02□□□□□ -1.77
TPM4P67936 AC073143.1-201ENST00000436316 395 ntBASIC4.02□□□□□ -1.77
TPM4P67936 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.02□□□□□ -1.77
TPM4P67936 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.02□□□□□ -1.77
TPM4P67936 RPL12P26-201ENST00000452430 487 ntBASIC4.02□□□□□ -1.77
TPM4P67936 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.02□□□□□ -1.77
TPM4P67936 AC010401.1-201ENST00000463867 348 ntBASIC4.02□□□□□ -1.77
TPM4P67936 AC231760.1-201ENST00000498002 260 ntBASIC4.02□□□□□ -1.77
TPM4P67936 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.02□□□□□ -1.77
TPM4P67936 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
TPM4P67936 AP001636.2-201ENST00000525517 696 ntBASIC4.02□□□□□ -1.77
TPM4P67936 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TPM4P67936 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.02□□□□□ -1.77
TPM4P67936 AC022884.3-201ENST00000579571 248 ntBASIC4.02□□□□□ -1.77
TPM4P67936 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.02□□□□□ -1.77
TPM4P67936 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.02□□□□□ -1.77
TPM4P67936 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.02□□□□□ -1.77
TPM4P67936 AC116651.1-201ENST00000609724 556 ntBASIC4.02□□□□□ -1.77
TPM4P67936 AC022149.2-201ENST00000621061 203 ntBASIC4.02□□□□□ -1.77
TPM4P67936 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
TPM4P67936 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.02□□□□□ -1.77
TPM4P67936 AC058791.1-201ENST00000608412 3198 ntBASIC4.02□□□□□ -1.77
TPM4P67936 AC024560.2-201ENST00000507981 1497 ntBASIC4.02□□□□□ -1.77
TPM4P67936 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.02□□□□□ -1.77
TPM4P67936 CCT8P1-201ENST00000413611 1657 ntBASIC4.02□□□□□ -1.77
TPM4P67936 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TPM4P67936 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.02□□□□□ -1.77
TPM4P67936 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TPM4P67936 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TPM4P67936 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TPM4P67936 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms